| Protein: | gi|20198060, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 643 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20198060, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
264.0 | [0..54] | [637..2051] |
|
Region A: Residues: [1-396] |
1 11 21 31 41 51
| | | | | |
1 MQRRSPPKHR HDGASPLPLG MDWSPPPRNW NGRDTIWPHD FRTGWSYCVT IPSWTLLSKS 60
61 KNSDPIVFYR VQVSVQSPEG VSTMRGILRR FNDFVKLLAD LKRAFPRKSF PSAPPKGFLR 120
121 VKSRDMLEER RCSLEDWMTK LLSDIELARS VVVASFLELE ATARSACQVV DQNASDSNDD 180
181 GNSTSLSSLV HPNSGGSSLL SSDYGSDTAY ETSELGSASL GQDDVSETDT GDLTLDEDLT 240
241 NPTEKLVKFS MSNIDEGLSM SQTIIEQLED FPKHRVHLGY ANDITETNSY NGKASKGVFR 300
301 ANNDLRCRSE SETSHSVMHD RKLSLESADG VSLLAGETST SSILSSIVHS QLDVNHDISV 360
361 GNLEIPGNGR IVLPLKMHSK LNRILLTMNE RLLNSK
|
| Detection Method: |  |
| Confidence: | 20.09691 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [397-643] |
1 11 21 31 41 51
| | | | | |
1 TDMEDLIARL NQETAVKEYL NRKVDDLEVE LETTKQRNKE NLEQALMTER QSVTKMQWDM 60
61 EELRQKTFEM ELKLKSKEDG SSDSKTSGNS TISESHELLQ EMDATKQQLE DLSRRYVELE 120
121 AKSKADIKVL VREVKSLRRS HMEMEKELTR SLTEKSDTEK LLQQERIIVE NTLEARRRLY 180
181 SDCEILHDRL KVNNTNLSMD ESSNNREDLS EVSNALQDQI EAQLLLGFDE TASEDELRKI 240
241 MADMYED
|
| Detection Method: | |
| Confidence: | 8.522879 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
