YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ORP3A_ARATH

General Information:
Name(s) found: ORP3A_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • Oxysterol-binding protein-related protein 3A OS=Arabidopsis thaliana GN=ORP3A PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 453 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IDA]
    Biological Process: double fertilization forming a zygote and endosperm [IMP]
    steroid metabolic process [ISS]
    Molecular Function: sterol binding [IDA]
    oxysterol binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNDPKNGG GFFASLASSI TNFGSAMSKS VNGLMGYEGL EVINPEGSTD DAEEEAGRGR  60
   61 WKQEERDGYW KMMQKYIGSD VTSMVTLPVI IFEPMTMLQK MAELMEYSYL LDMADKTEDP 120
  121 YMRMVYASSW AISVYYAYQR TWKPFNPILG ETYEMTNHNG INFIAEQVCH HPPMSAGHAE 180
  181 NEHFAYDCTS KLKTKFLGNS IDVYPVGRTR VTLKRDGVVL DLVPPLTKVH NLIFGRTWVD 240
  241 SPGEMVMTNL TTGDKVVLYF QPCGWFGSGR YEVDGYVYNS AEEPKMLMTG KWNESLSYQP 300
  301 CDAEGEPLPG TELKEVWKVA EAPKNDKYQY THFAHKINSF DTAPKKLLSS DSRLRPDRYA 360
  361 LEMGDMSKSG FEKSSLEDRQ RAEKKSREEK GQKFAPKWFD ETEEVTPTPW GDLEVYQFNG 420
  421 KYSVHRATAE NSEDTTDVKL TQFNPWQFQD LSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..453] PSI-BLAST 74.0 Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxysterol binding
    		•  5.22335714957681 bayes_pls_golite062009
  • sterol binding
    		•  4.18891468109664 bayes_pls_golite062009
    		• 3.02967613614595 bayes_pls_golite062009
  • steroid binding
    		•  2.54679035876403 bayes_pls_golite062009
  • binding
    		•  1.96043183869108 bayes_pls_golite062009
  • phosphoinositide binding
    		•  1.88386267925687 bayes_pls_golite062009
  • lipid binding
    		•  1.8520231230392 bayes_pls_golite062009
  • phospholipid binding
    		•  1.53854106315366 bayes_pls_golite062009
  • cholesterol binding
    		•  0.644339278395346 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle