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Protein Overview: gi|25354022, gi|...

General Information:
Name(s) found: gi|3850584 [NCBI NR]
gi|25354022 [NCBI NR]
gi|15218739 [NCBI NR]
gi|12083232 [NCBI NR]
Description(s) found:
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  • gi|3850584|gb|AAC72124.1| ESTs gb|H37641 and gb|AA651422 come from this gene. [Arabidopsis thaliana] [NCBI NR]
  • pir||D86163 F15K9.19 protein - Arabidopsis thaliana [NCBI NR]
  • gi|15218739|ref|NP_171820.1| phenazine biosynthesis PhzC/PhzF family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12083232|gb|AAG48775.1|AF332412_1 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9ZVS2) F15K9.19 protein (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|3850584|gb|AAC72124.1| ESTs gb|H37641 and gb|AA651422 come from this gene. [Arabidopsis thaliana]gi|25354022|pir||D86163 F15K9.19 protein - Arabidopsis thalianagi|15218739|ref|NP_171820.1| phenazine biosynthesis [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Phenazine biosynthesis PhzC/PhzF family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | phenazine biosynthesis PhzC/PhzF family protein | chr1:782948-784240 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • catalytic [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ESTs gb|H37641 and gb|AA651422 come from this gene. [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Phenazine biosynthesis PhzC/PhzF protein | chr1:782948-784240 FORWARD LENGTH=286 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • F15K9.19 protein OS=Arabidopsis thaliana GN=F15K9.19 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 286 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: biosynthetic process [IEA][ISS]
    Molecular Function: catalytic activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKKRVKYF IVDAFAESAF KGNPAAVCFL EDDNERDDAW LQSLATEFNI SETCFLTPII  60
   61 GDLPRFRLRW FTPVAEVDLC GHATLASAHV LFSTGLVGSE TVEFDTLSGI LTAKHLKNDD 120
  121 DGEESSIELD FPVVPTYEVN YIDDDLSLFS KALNGATILD VKATKKDLLV VLSSWEAVID 180
  181 LKPRLDEISK CPCEGMMVTA AASDGSTYDF CSRYFAPRFG INEDPVTGSA HCALAHYWSL 240
  241 RMNKCDFFAY QASSRGGTLK VHLDKEKQRV LLRGKAVTVM EGYVLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..286] PSI-BLAST 53.0 Crystal structure of phenazine biosynthesis protein PhzF family (Enterococcus faecalis)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.00848565859536 bayes_pls_golite062009
  • amino-acid racemase activity
    		•  0.0628393252100677 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle