YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Y5758_ARATH

General Information:
Name(s) found: Y5758_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • BTB/POZ domain-containing protein At5g17580 OS=Arabidopsis thaliana GN=At5g17580 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 548 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: response to light stimulus [IEA][ISS]
    Molecular Function: protein binding [IEA]
    signal transducer activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASYVSDLH INVKGVPFHL CKEMLAKRSS KVSSLLERNE IDELRLILRD LEVDPETFEL  60
   61 VARFCNGSEF KFTSDTIVSV LCIAYYLGMN EEQSSNNLLG KASEFLEHRV FPSWSETINA 120
  121 LRSGDKSFDK LADVGLVDVF FDSLIEKASY DPRLLGELIK NRAETDDYRP NPRRRLFVID 180
  181 WKSEDLITIP LRLYEPFMIR AIKSRSIPVE YIVLSVCKYA KKWVFDTEES LSGQKREAIE 240
  241 VVERLLPYQR GLISCELLFE SLKHSIWLEA SSECQNGFMI RICKQLDMAK STDLKILSRG 300
  301 YGEKAEGFEN IELVKTVVKS FYTYYANEDS ETVSHFVKVA KLSEEFLFLA ASEASLKLEA 360
  361 FVELAEMTVA VSQGILSYSD GIYRAIDVFL ESHRYLTESE KMEVCKVLEC GKLSQEGFER 420
  421 AAKNQKLPLR IVVNVLCVSQ LQIRDTVAKE IKGMEEKVDE EEEEEIEVSS DEDEMEKMSN 480
  481 KLLGLEIEND ECVVHRRKNM KKKKKKISVW GQVKRKFGCL NSSSSSYSVD ACTCDVKKKK 540
  541 KKIHHHYE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..157] PSI-BLAST 18.69897 No description for 2nn2A was found.
    2 View Details [158..245] deduced N/A No confident structure predictions are available.
    3 View Details [246..350] PSI-BLAST 5.0 No description for 2dyhA was found.
    4 View Details [351..451] MSA 3.073989 View MSA. No confident structure predictions are available.
    5 View Details [452..548] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle