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Protein Overview: TR120_ARATH

General Information:
Name(s) found: TR120_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Trafficking protein particle complex II-specific subunit 120 homolog OS=Arabidopsis thaliana GN=TRS120 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1186 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPDVSIETL SIIRIAVLPI GTIPPTLLRD YHSMLLRHHT IALSAISSFY TEHQKSPFTN  60
   61 QPWDSGSLRF KFVLGGSPPS PWEDFQSNRK MLAVIGLCHC PSSPDLDSVT EKFNVACKSY 120
  121 SSALVRRCFA FSPGDSQLED GDKKGENLIL FPPSDKQTQE FHLQTMMQDI AASLLMEFEK 180
  181 WVLQAESAGT ILKTPLDSQA SLNSEEVIKA KKRRLGRAQK TIGDYSLLAG SPVDANAHYS 240
  241 TALELARLTG DYFWYAGALE GSVCALLVDR MGQRDVALED EVRYRYTNVI LHYRKSFIQE 300
  301 IAQRVSPLSF ELEATLKLAR FLCRRELAKE VVELLTNAAD GAKSLIDASD RLILYVEVAR 360
  361 LFGALGYQRK AAFFCRQVAQ LYLQQDNRLA AISAMQVLSM TTDAYRIQSR ASMSKVSVNN 420
  421 ETGRLPDAGK MHHHSIVSLF ESHWSTLQMV VLREILLSAV RAGDPLAAWS AAARLLRWHY 480
  481 PLITPSGQNG LANSLANSAD RLPSGTRCAD PALPFVRLFS FPLHSSQVDI VKRNPAREDW 540
  541 WTGSAPSGPF IYTPFSKGDA NESSKQELIW VVGEPVQVLV ELANPCCFDL RIDSIYLSAH 600
  601 SSNFDAFPVS VDIPPNSAKV ITLSGIPTAV GPVTIPGCTV HCFGVITEHV FRDVDNLLLG 660
  661 AAQGLVFSDP FRSCGSAKLR HVFVPNISVA PPLPLLVANV VGGDGAIILY EGEIREVCIN 720
  721 FANAGTVPIV QAHVSLSGKN QDAVISIADE ALQSALPLKP GAQVTLPVTL KAWHVGPTDS 780
  781 DNTMSSGRNA AGNTGRPKDG TSPSLLIHYA GPLSNNGDSQ EKESIVPPGR RLVVPLQICV 840
  841 LQGLSFVKAR LLSMEIPAHV SDNLRDEDIE RESNADSLVK INPFRGSWGL RFLELELSNP 900
  901 TDVVFEISVF VQLENSAKED DSSPVQDSPE YEYPKTRIDR DYSARVLIPL EHFKLPVLDG 960
  961 SFFTKDPPPG SPSSSRNPSF SEKNTKAEIN TLIKNLISKI KVRWQSGRNS SGELDIKDAI1020
 1021 QTALQTTVMD VLLPDPLTFG FRLVRNGLEK DPETKAESPF SKGSVLSHEV TPMEVLVRNN1080
 1081 TSEAIKLNLS VTCRDVAGQN CTEGADATVL WAGALSGISM EVAPLQEARH CFSLFFLVPG1140
 1141 EYTMVAAAVI EDANNVLRAR AGTASPNEPI FCRGPPFHVC VAGGAL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..206] Pfam 80.366532 No description for PF08626.3 was found. No confident structure predictions are available.
    2 View Details [207..299] MSA 3.102991 View MSA. No confident structure predictions are available.
    3 View Details [300..502] deduced N/A No confident structure predictions are available.
    4 View Details [503..699] MSA 2.097991 View MSA. No confident structure predictions are available.
    5 View Details [700..879] deduced N/A No confident structure predictions are available.
    6 View Details [880..956] deduced N/A No confident structure predictions are available.
    7 View Details [957..1043] deduced N/A No confident structure predictions are available.
    8 View Details [1044..1186] MSA 1.072988 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle