YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|15240797, gi|...

General Information:
Name(s) found: gi|7576186 [NCBI NR]
gi|15240797 [NCBI NR]
gi|11255838 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|7576186|emb|CAB87937.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15240797|ref|NP_196365.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T49887 hypothetical protein T2I1.190 - Arabidopsis thaliana [NCBI NR]
  • (Q9LY13) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|15240797|ref|NP_196365.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana]gi|11255838|pir||T49887 hypothetical protein T2I1.190 - Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Oxidoreductase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr5:2367168-2369555 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: KUOX1 | KAR-UP oxidoreductase 1 | chr5:2367167-2369554 FORWARD LENGTH=340 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • KAR-UP oxidoreductase 1 OS=Arabidopsis thaliana GN=T2I1_190 PE=3 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 340 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: flavonoid biosynthetic process [ISS]
    Molecular Function: oxidoreductase activity [IEA]
    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKGEDSSTF KMGNSAQERS LPYVPDCYVV PPSSKPCDSN SGIVPTIDVS RLKGGDDERR  60
   61 GIVNHGINQN ILDDALEVAN SFFELPAKEK KQFMSNDVYA PVRYSTSLKD GLDTIQFWRI 120
  121 FLKHYAHPLH RWIHLWPENP PGYREKMGKF CEEVRKLSIE LMGAITESLG LGRDYLSSRM 180
  181 DENGMQVMTV NCYPPCPDPE TALGLPPHSD YSCITLLLQN LDGLKIFDPM AHGGSGRWVG 240
  241 VPQVTGVLKV HIGDHVEVLS NGLYKSIVHK VTLNEEKTRI SLASLHSLGM DDKMSVPREL 300
  301 VNDENPVRYK ESSFNDFLDF LVKNDISQGD RFIDTLRIKD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..340] PSI-BLAST 75.69897 The structure of ACC oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.29176034651701 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.188497825387454 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle