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View Structure Prediction Details

Protein: gi|15240797, gi|...
Organism: Arabidopsis thaliana
Length: 340 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240797, gi|....

Description E-value Query
Range
Subject
Range
gi|50932077, gi|... - gi|50932077|ref|XP_475566.1| putative leucoanthocyanidin dioxygenase (EC 1.14.11.-) [Oryza sativa (j...
303.0 [0..7] [338..10]

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Predicted Domain #1
Region A:
Residues: [1-340]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKGEDSSTF KMGNSAQERS LPYVPDCYVV PPSSKPCDSN SGIVPTIDVS RLKGGDDERR  60
   61 GIVNHGINQN ILDDALEVAN SFFELPAKEK KQFMSNDVYA PVRYSTSLKD GLDTIQFWRI 120
  121 FLKHYAHPLH RWIHLWPENP PGYREKMGKF CEEVRKLSIE LMGAITESLG LGRDYLSSRM 180
  181 DENGMQVMTV NCYPPCPDPE TALGLPPHSD YSCITLLLQN LDGLKIFDPM AHGGSGRWVG 240
  241 VPQVTGVLKV HIGDHVEVLS NGLYKSIVHK VTLNEEKTRI SLASLHSLGM DDKMSVPREL 300
  301 VNDENPVRYK ESSFNDFLDF LVKNDISQGD RFIDTLRIKD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 75.69897
Match: 1w9yA
Description: The structure of ACC oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.29176034651701 bayes_pls_golite062009
oxidoreductase activity 0.188497825387454 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle