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Protein Overview: FLD_ARATH

General Information:
Name(s) found: FLD_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75169873|sp|Q9CAE3.1|LDL3_ARATH RecName: Full=Lysine-specific histone demethylase 1 homolog 3; AltName: Full=Flavin-containing amine oxidase domain-containing protein 3; AltName: Full=Protein LSD1-LIKE 3; AltName: Full=Protein FLOWERING LOCUS D; AltNam [NCBI NR]
  • gi|61661320|gb|AAX51266.1| flowering locus D [Arabidopsis thaliana] [NCBI NR]
  • gi|15228277|ref|NP_187650.1| FLD (FLOWERING LOCUS D); amine oxidase [Arabidopsis thaliana] [NCBI NR]
  • gi|12322798|gb|AAG51395.1|AC011560_27 hypothetical protein; 118064-115538 [Arabidopsis thaliana] [NCBI NR]
  • Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana GN=FLD PE=1 SV=1 [Swiss-Prot]
  • Protein FLOWERING LOCUS D OS=Arabidopsis thaliana GN=FLD PE=1 SV=1 [Swiss-Prot]
  • (Q9CAE3) Hypothetical protein [athaliana3702.FASTAC.txt]
  • hypothetical protein; 118064-115538 [Arabidopsis thaliana]gi|15228277|ref|NP_187650.1| amine oxidase family protein / SWIRM domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Amine oxidase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: FLD | FLD (FLOWERING LOCUS D); amine oxidase | chr3:3229298-3231824 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • flowering locus D [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • FLD (FLOWERING LOCUS D); amine oxidase/ oxidoreductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein; 118064-115538 [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 789 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: vegetative to reproductive phase transition of meristem [IMP]
    histone deacetylation [IMP]
    positive regulation of flower development [IMP]
    Molecular Function: oxidoreductase activity [IEA]
    electron carrier activity [IEA]
    amine oxidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSFSAPKKR RRGRSQRSMS SLNSLPVPNV GLLPGNSNFV SSSASSSGRF NVEVVNGSNQ  60
   61 TVKSYPGIGD EIITINKEAT TEALLALTAG FPADSLTEEE IEFGVVPIVG GIEQVNYILI 120
  121 RNHIISKWRE NISSWVTKEM FLNSIPKHCS SLLDSAYNYL VTHGYINFGI AQAIKDKFPA 180
  181 QSSKSSVIIV GAGLSGLAAA RQLMRFGFKV TVLEGRKRPG GRVYTKKMEA NRVGAAADLG 240
  241 GSVLTGTLGN PLGIIARQLG SSLYKVRDKC PLYRVDGKPV DPDVDIKVEV AFNQLLDKAS 300
  301 KLRQLMGDVS MDVSLGAALE TFRQVSGNDV ATEEMGLFNW HLANLEYANA GLVSKLSLAF 360
  361 WDQDDPYDMG GDHCFLPGGN GRLVQALAEN VPILYEKTVQ TIRYGSNGVK VTAGNQVYEG 420
  421 DMVLCTVPLG VLKNGSIKFV PELPQRKLDC IKRLGFGLLN KVAMLFPYVF WSTDLDTFGH 480
  481 LTEDPNYRGE FFLFYSYAPV AGGALLIALV AGEAAHKFET MPPTDAVTRV LHILRGIYEP 540
  541 QGINVPDPLQ TVCTRWGGDP FSLGSYSNVA VGASGDDYDI LAESVGDGRL FFAGEATTRR 600
  601 YPATMHGAFV TGLREAANMA QSAKARGIRK RIDRNPSRNA HSCAILLADL FRDPDLEFGS 660
  661 FCIIFSRRNP DPKSPAILRV TLSEPRKRNE DPKADQHSNK ILFQQLQSHF NQQQQIQVYT 720
  721 LLTRQQALDL REVRGGDEKR LYYLCETLGV KLVGRKGLGV GADSVIASIK AERTGRKLPS 780
  781 SSTSGTKSG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..91] deduced N/A No confident structure predictions are available.
    2 View Details [92..435] PSI-BLAST 26.522879 The Crystal Structure and Reaction Mechanism of E. coli 2,4-Dienoyl CoA Reductase
    3 View Details [436..511] PSI-BLAST 11.09691 Udp-galactopyranose mutase from Mycobacterium Tuberculosis
    4 View Details [512..638] PSI-BLAST 39.0 No description for 2v1dA was found.
    5 View Details [639..789] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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