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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FLD_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.25
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSFSAPKKR RRGRSQRSMS SLNSLPVPNV GLLPGNSNFV SSSASSSGRF NVEVVNGSNQ  60
   61 TVKSYPGIGD EIITINKEAT TEALLALTAG FPADSLTEEE IEFGVVPIVG GIEQVNYILI 120
  121 RNHIISKWRE NISSWVTKEM FLNSIPKHCS SLLDSAYNYL VTHGYINFGI AQAIKDKFPA 180
  181 QSSKSSVIIV GAGLSGLAAA RQLMRFGFKV TVLEGRKRPG GRVYTKKMEA NRVGAAADLG 240
  241 GSVLTGTLGN PLGIIARQLG SSLYKVRDKC PLYRVDGKPV DPDVDIKVEV AFNQLLDKAS 300
  301 KLRQLMGDVS MDVSLGAALE TFRQVSGNDV ATEEMGLFNW HLANLEYANA GLVSKLSLAF 360
  361 WDQDDPYDMG GDHCFLPGGN GRLVQALAEN VPILYEKTVQ TIRYGSNGVK VTAGNQVYEG 420
  421 DMVLCTVPLG VLKNGSIKFV PELPQRKLDC IKRLGFGLLN KVAMLFPYVF WSTDLDTFGH 480
  481 LTEDPNYRGE FFLFYSYAPV AGGALLIALV AGEAAHKFET MPPTDAVTRV LHILRGIYEP 540
  541 QGINVPDPLQ TVCTRWGGDP FSLGSYSNVA VGASGDDYDI LAESVGDGRL FFAGEATTRR 600
  601 YPATMHGAFV TGLREAANMA QSAKARGIRK RIDRNPSRNA HSCAILLADL FRDPDLEFGS 660
  661 FCIIFSRRNP DPKSPAILRV TLSEPRKRNE DPKADQHSNK ILFQQLQSHF NQQQQIQVYT 720
  721 LLTRQQALDL REVRGGDEKR LYYLCETLGV KLVGRKGLGV GADSVIASIK AERTGRKLPS 780
  781 SSTSGTKSG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle