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Protein Overview: CRF6_ARATH

General Information:
Name(s) found: CRF6_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 315 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: embryonic development ending in seed dormancy [IGI]
    leaf development [IMP]
    regulation of transcription, DNA-dependent [ISS]
    transcription factor import into nucleus [IDA]
    cotyledon development [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERRTRRVKF TENRTVTNVA ATPSNGSPRL VRITVTDPFA TDSSSDDDDN NNVTVVPRVK  60
   61 RYVKEIRFCQ GESSSSTAAR KGKHKEEESV VVEDDVSTSV KPKKYRGVRQ RPWGKFAAEI 120
  121 RDPSSRTRIW LGTFVTAEEA AIAYDRAAIH LKGPKALTNF LTPPTPTPVI DLQTVSACDY 180
  181 GRDSRQSLHS PTSVLRFNVN EETEHEIEAI ELSPERKSTV IKEEEESSAG LVFPDPYLLP 240
  241 DLSLAGECFW DTEIAPDLLF LDEETKIQST LLPNTEVSKQ GENETEDFEF GLIDDFESSP 300
  301 WDVDHFFDHH HHSFD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..91] deduced N/A No confident structure predictions are available.
    2 View Details [92..171] PSI-BLAST 25.522879 GCC-box binding domain
    3 View Details [172..315] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.339357445627225 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle