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Protein Overview: gi|4314388, gi|2...

General Information:
Name(s) found: gi|4314388 [NCBI NR]
gi|34098799 [NCBI NR]
gi|25407899 [NCBI NR]
gi|18401431 [NCBI NR]
gi|15450830 [NCBI NR]
Description(s) found:
Found 16 descriptions.
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  • gi|4314388|gb|AAD15598.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|34098799|gb|AAQ56782.1| At2g27460 [Arabidopsis thaliana] [NCBI NR]
  • pir||B84673 hypothetical protein At2g27460 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|18401431|ref|NP_565651.1| sec23/sec24 transport family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15450830|gb|AAK96686.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 745 amino acids

    Gene Ontology:
    Cellular Component: COPII vesicle coat [IEA]
    Biological Process: ER to Golgi vesicle-mediated transport [IEA]
    vesicle-mediated transport [ISS]
    intracellular protein transport [IEA]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVRATVSRF PIDSDAQEAS GLPWGLTVTP FAAKDENGIG PACGSNGHLL PRCENCYAYF  60
   61 NTYCELDQWA WNCSLCGTLN GLPSDAIARY SNPHSIPEMT SSFIDLEMPL DGSEEEMTQA 120
  121 RPVYVAAIDI SSSEEFLELT KSALLAALEA LSPGALFGLV TFSHKIGLYD VQGPIPVVKN 180
  181 VFIPPDGESS LSLELEDVMP LLQFLAPVET CKDRIAAALE TLRPITSWER SAGAGQGMDS 240
  241 VLMGGRGFGT AMEALFNYLG SEFGNTFALA RVFAFLSGPP DYGRGQLDTS RYGEQYASKR 300
  301 VDADRALLPE QTPFYKDLAT IAVQSGVCVD LFAVTNEYTD LASLKFLSIE SGGSLFLYSS 360
  361 TDDSTLPQDM FRMLNRPYAF NCVLRLRTST EFKPGNSFGH FFPDPQYENL QHIICCDSYA 420
  421 TYAYDFEFAD NTGFSRHSGE QPVVQIAFQY TVVVPPEGLS NSEMSSSSRG KHTLQRRLRI 480
  481 RTMQFGTAHN INEIYDSVDH EVVLSLLVHK VILASLEDGV REGRALLHDW LVILTAQYND 540
  541 AFNLVQYKNG NKSMSSQIDI TFSQCPQLEP LPRLVFALLR NPLLRFHEEG VHPDYRIYLQ 600
  601 CLFSVLDPSS LHCGIYPALM SYSTPDTLAY PRHSLSRAAL ITSGSPIFFL DAYTTLIVFY 660
  661 SSTADPSIPF PPPQDCLLRQ TINKVKQERS ITPKLVFIRG GRDDATVFEN YLIEEQDVDG 720
  721 NGFASAMGFV SFLDDISQRV TEYMK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..745] PSI-BLAST 1000.0 No description for 2nupA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle