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View Structure Prediction Details

Protein: gi|4314388, gi|2...
Organism: Arabidopsis thaliana
Length: 745 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4314388, gi|2....

Description E-value Query
Range
Subject
Range
gi|73991096, gi|... - gi|73991096|ref|XP_857053.1| PREDICTED: similar to Sec23 (S. cerevisiae) homolog B isoform 10 [Canis...
740.0 [0..2] [738..16]

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Predicted Domain #1
Region A:
Residues: [1-745]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVRATVSRF PIDSDAQEAS GLPWGLTVTP FAAKDENGIG PACGSNGHLL PRCENCYAYF  60
   61 NTYCELDQWA WNCSLCGTLN GLPSDAIARY SNPHSIPEMT SSFIDLEMPL DGSEEEMTQA 120
  121 RPVYVAAIDI SSSEEFLELT KSALLAALEA LSPGALFGLV TFSHKIGLYD VQGPIPVVKN 180
  181 VFIPPDGESS LSLELEDVMP LLQFLAPVET CKDRIAAALE TLRPITSWER SAGAGQGMDS 240
  241 VLMGGRGFGT AMEALFNYLG SEFGNTFALA RVFAFLSGPP DYGRGQLDTS RYGEQYASKR 300
  301 VDADRALLPE QTPFYKDLAT IAVQSGVCVD LFAVTNEYTD LASLKFLSIE SGGSLFLYSS 360
  361 TDDSTLPQDM FRMLNRPYAF NCVLRLRTST EFKPGNSFGH FFPDPQYENL QHIICCDSYA 420
  421 TYAYDFEFAD NTGFSRHSGE QPVVQIAFQY TVVVPPEGLS NSEMSSSSRG KHTLQRRLRI 480
  481 RTMQFGTAHN INEIYDSVDH EVVLSLLVHK VILASLEDGV REGRALLHDW LVILTAQYND 540
  541 AFNLVQYKNG NKSMSSQIDI TFSQCPQLEP LPRLVFALLR NPLLRFHEEG VHPDYRIYLQ 600
  601 CLFSVLDPSS LHCGIYPALM SYSTPDTLAY PRHSLSRAAL ITSGSPIFFL DAYTTLIVFY 660
  661 SSTADPSIPF PPPQDCLLRQ TINKVKQERS ITPKLVFIRG GRDDATVFEN YLIEEQDVDG 720
  721 NGFASAMGFV SFLDDISQRV TEYMK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2nupA
Description: No description for 2nupA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle