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Protein Overview: PP320_ARATH

General Information:
Name(s) found: PP320_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 871 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: phloem or xylem histogenesis [IMP]
    leaf development [IMP]
    cotyledon vascular tissue pattern formation [IMP]
    leaf vascular tissue pattern formation [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMLVTNLSS SSFCFFSSPH LQNQKEIRSG VRVRKYVIFN RASLRTVSDC VDSITTFDRS  60
   61 VTDANTQLRR FCESGNLENA VKLLCVSGKW DIDPRTLCSV LQLCADSKSL KDGKEVDNFI 120
  121 RGNGFVIDSN LGSKLSLMYT NCGDLKEASR VFDEVKIEKA LFWNILMNEL AKSGDFSGSI 180
  181 GLFKKMMSSG VEMDSYTFSC VSKSFSSLRS VHGGEQLHGF ILKSGFGERN SVGNSLVAFY 240
  241 LKNQRVDSAR KVFDEMTERD VISWNSIING YVSNGLAEKG LSVFVQMLVS GIEIDLATIV 300
  301 SVFAGCADSR LISLGRAVHS IGVKACFSRE DRFCNTLLDM YSKCGDLDSA KAVFREMSDR 360
  361 SVVSYTSMIA GYAREGLAGE AVKLFEEMEE EGISPDVYTV TAVLNCCARY RLLDEGKRVH 420
  421 EWIKENDLGF DIFVSNALMD MYAKCGSMQE AELVFSEMRV KDIISWNTII GGYSKNCYAN 480
  481 EALSLFNLLL EEKRFSPDER TVACVLPACA SLSAFDKGRE IHGYIMRNGY FSDRHVANSL 540
  541 VDMYAKCGAL LLAHMLFDDI ASKDLVSWTV MIAGYGMHGF GKEAIALFNQ MRQAGIEADE 600
  601 ISFVSLLYAC SHSGLVDEGW RFFNIMRHEC KIEPTVEHYA CIVDMLARTG DLIKAYRFIE 660
  661 NMPIPPDATI WGALLCGCRI HHDVKLAEKV AEKVFELEPE NTGYYVLMAN IYAEAEKWEQ 720
  721 VKRLRKRIGQ RGLRKNPGCS WIEIKGRVNI FVAGDSSNPE TENIEAFLRK VRARMIEEGY 780
  781 SPLTKYALID AEEMEKEEAL CGHSEKLAMA LGIISSGHGK IIRVTKNLRV CGDCHEMAKF 840
  841 MSKLTRREIV LRDSNRFHQF KDGHCSCRGF W

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] deduced N/A No confident structure predictions are available.
    2 View Details [93..291] PSI-BLAST 5.39794 No description for 3cvqA was found.
    3 View Details [292..392] MSA 1.800996 View MSA. No confident structure predictions are available.
    4 View Details [393..781] PSI-BLAST 33.69897 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
    5 View Details [782..871] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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