YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PP320_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMLVTNLSS SSFCFFSSPH LQNQKEIRSG VRVRKYVIFN RASLRTVSDC VDSITTFDRS  60
   61 VTDANTQLRR FCESGNLENA VKLLCVSGKW DIDPRTLCSV LQLCADSKSL KDGKEVDNFI 120
  121 RGNGFVIDSN LGSKLSLMYT NCGDLKEASR VFDEVKIEKA LFWNILMNEL AKSGDFSGSI 180
  181 GLFKKMMSSG VEMDSYTFSC VSKSFSSLRS VHGGEQLHGF ILKSGFGERN SVGNSLVAFY 240
  241 LKNQRVDSAR KVFDEMTERD VISWNSIING YVSNGLAEKG LSVFVQMLVS GIEIDLATIV 300
  301 SVFAGCADSR LISLGRAVHS IGVKACFSRE DRFCNTLLDM YSKCGDLDSA KAVFREMSDR 360
  361 SVVSYTSMIA GYAREGLAGE AVKLFEEMEE EGISPDVYTV TAVLNCCARY RLLDEGKRVH 420
  421 EWIKENDLGF DIFVSNALMD MYAKCGSMQE AELVFSEMRV KDIISWNTII GGYSKNCYAN 480
  481 EALSLFNLLL EEKRFSPDER TVACVLPACA SLSAFDKGRE IHGYIMRNGY FSDRHVANSL 540
  541 VDMYAKCGAL LLAHMLFDDI ASKDLVSWTV MIAGYGMHGF GKEAIALFNQ MRQAGIEADE 600
  601 ISFVSLLYAC SHSGLVDEGW RFFNIMRHEC KIEPTVEHYA CIVDMLARTG DLIKAYRFIE 660
  661 NMPIPPDATI WGALLCGCRI HHDVKLAEKV AEKVFELEPE NTGYYVLMAN IYAEAEKWEQ 720
  721 VKRLRKRIGQ RGLRKNPGCS WIEIKGRVNI FVAGDSSNPE TENIEAFLRK VRARMIEEGY 780
  781 SPLTKYALID AEEMEKEEAL CGHSEKLAMA LGIISSGHGK IIRVTKNLRV CGDCHEMAKF 840
  841 MSKLTRREIV LRDSNRFHQF KDGHCSCRGF W

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle