YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|6730739, gi|1...

General Information:
Name(s) found: gi|6730739 [NCBI NR]
gi|51536562 [NCBI NR]
gi|48958493 [NCBI NR]
gi|25406668 [NCBI NR]
gi|15220146 [NCBI NR]
Description(s) found:
Found 14 descriptions.
SHOW ALL
  • gi|6730739|gb|AAF27129.1|AC018849_17 hypothetical protein; 58060-60358 [Arabidopsis thaliana] [NCBI NR]
  • gi|51536562|gb|AAU05519.1| At1g80480 [Arabidopsis thaliana] [NCBI NR]
  • gi|48958493|gb|AAT47799.1| At1g80480 [Arabidopsis thaliana] [NCBI NR]
  • pir||F96836 hypothetical protein T21F11.27 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15220146|ref|NP_178163.1| PTAC17 (PLASTID TRANSCRIPTIONALLY ACTIVE17) [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 444 amino acids

    Gene Ontology:
    Cellular Component: nucleoid [IDA]
    chloroplast stroma [IDA]
    plastid chromosome [IDA]
    chloroplast [IDA]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLSTLEIA TTFLSFTAPR SSAAFNYRFS SAAVSVLSRP RATTVSVRTT PSFFYSPVVR  60
   61 RQRFSSVSAS ATQTEDSDVT TKIPPDNRIP ATIITGFLGS GKTTLLNHIL TRDHGKRIAV 120
  121 IENEFGEVDI DGSLVASKSI GAEDIVMLNN GCLCCTVRGD LVRMIGELVN TKKGKFDHIV 180
  181 IETTGLANPA PIIQTFYAEE EIFNDVKLDG VVTLVDAKHA RLHLDEVKPE GVVNEAVEQI 240
  241 AYADRIIVNK TDLVGEAELG SVVQRIKTIN SMAQMTRTKY GNVDLDYVLG IGGFDLERIE 300
  301 SSVNEDDKGD HHDHDHDHHH DHNHDHDHHH HDGHDHHHHS HDHTHDPGVS SVSIVCEGSL 360
  361 DLEKANMWLG TLLMERSEDI YRMKGLLSVH TMEERFVFQG VHDIFQGSPD RLWGREEERV 420
  421 NKIVFIGKNL NREELEKGFK ACLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..84] PSI-BLAST 20.39794 No description for 2iy3A was found.
    2 View Details [85..444] PSI-BLAST 54.0 Hypothetical protein YjiA, N-terminal domain; Hypothetical protein YjiA, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle