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Protein Overview: gi|6692256, gi|2...

General Information:
Name(s) found: gi|6692256 [NCBI NR]
gi|25404819 [NCBI NR]
gi|15222383 [NCBI NR]
gi|12325188 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|6692256|gb|AAF24607.1|AC021046_5 unknown protein; 13882-11487 [Arabidopsis thaliana] [NCBI NR]
  • pir||G96717 hypothetical protein T6C23.19 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15222383|ref|NP_177119.1| structural constituent of ribosome [Arabidopsis thaliana] [NCBI NR]
  • gi|12325188|gb|AAG52539.1|AC013289_6 hypothetical protein; 83948-81553 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 636 amino acids

    Gene Ontology:
    Cellular Component: ribosome [IEA]
    intracellular [IEA]
    Biological Process: translation [IEA]
    Molecular Function: structural constituent of ribosome [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIVTTKTKT YTTTNFDFSN KGFGVGGLKQ FVYGNTFIVL DAFWVSFSNL FRVNPDKETS  60
   61 LVLFEKQNTK DSSVFGDHQD QNQICGTQDD DQMESSLVSI SKRCEFYSDN KSIVGFVEEP 120
  121 KAFSFKFHEY SAITVQEEEK KKMVSFSDEK TSSMVLEKSE SDGFMKEHVK EEMLVYEFMS 180
  181 CGVLKESLVH ENLVGGEDNL FDDDDGFIEL NPSLQISNFA YGEEEEEEFI HREEEMKMGF 240
  241 DEQEEVYDEF DDGSDSDDDE FEHSDVIEKL KTELRTARTG GLCTILEESE TPLQELKPLK 300
  301 IEPKPDQHKD RIAEIHKVYK NYAVKMRKLD VIDSQTMHSI SLLKLKDSSK PSRNTDKPPK 360
  361 SSLHQNIWPF KKHTLECDPS ERLVKEASRD FETVYVGQVC LSWEMLRWQY DKVLEFDSQV 420
  421 TTYQYNLVAG EFQLFQVLLQ RFVENEPFQN SSRVETYLKN RRHFQNFLQI PLVRDDRSSK 480
  481 KKCRYEGEFA VKTEMLREII RESMSVFWEF LCADKDEFTS MMKVSHQTQV SPQDSLDLEL 540
  541 LTDIRTHLQK KEKKLKEIQR SQSCIVKKLK KNESKSSIGV KDELLIAKIE LRLVSRVMYM 600
  601 SKLTTEKLHW CQEKLEKISF NGRKIHMEPY FSLLPC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..239] deduced N/A No confident structure predictions are available.
    2 View Details [240..476] MSA 1.014948 View MSA. No confident structure predictions are available.
    3 View Details [477..636] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle