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Protein Overview: ZHD11_ARATH

General Information:
Name(s) found: ZHD11_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Zinc-finger homeodomain protein 11 OS=Arabidopsis thaliana GN=ZHD11 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 242 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: response to water deprivation [IMP]
    Molecular Function: DNA binding [IDA][ISS]
    transcription factor activity [IDA][ISS]
    transcription activator activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLSSKPQQQ LLNSLPIAGE LTVTGEMGVC YKECLKNHAA NLGGHALDGC GEFMPSPTAT  60
   61 STDPSSLRCA ACGCHRNFHR RDPSENLNFL TAPPISSPSG TESPPSRHVS SPVPCSYYTS 120
  121 APPHHVILSL SSGFPGPSDQ DPTVVRSENS SRGAMRKRTR TKFTPEQKIK MRAFAEKAGW 180
  181 KINGCDEKSV REFCNEVGIE RGVLKVWMHN NKYSLLNGKI REIEHGLCLN THSNDGDGSS 240
  241 SS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..83] Pfam 40.19382 No description for PF04770.3 was found. No confident structure predictions are available.
    2 View Details [84..242] PSI-BLAST 13.30103 Pit-1 POU homeodomain; Pit-1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.971797124886045 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.74904610690468 bayes_pls_golite062009
  • DNA binding
    		•  0.73457854282882 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle