| Protein: | ZHD11_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 242 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZHD11_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
128.0 | [0..81] | [242..42] |
|
Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MDLSSKPQQQ LLNSLPIAGE LTVTGEMGVC YKECLKNHAA NLGGHALDGC GEFMPSPTAT 60
61 STDPSSLRCA ACGCHRNFHR RDP
|
| Detection Method: |  |
| Confidence: | 40.19382 |
| Match: | PF04770.3 |
| Description: | No description for PF04770.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [84-242] |
1 11 21 31 41 51
| | | | | |
1 SENLNFLTAP PISSPSGTES PPSRHVSSPV PCSYYTSAPP HHVILSLSSG FPGPSDQDPT 60
61 VVRSENSSRG AMRKRTRTKF TPEQKIKMRA FAEKAGWKIN GCDEKSVREF CNEVGIERGV 120
121 LKVWMHNNKY SLLNGKIREI EHGLCLNTHS NDGDGSSSS
|
| Detection Method: | |
| Confidence: | 13.30103 |
| Match: | 1au7A |
| Description: | Pit-1 POU homeodomain; Pit-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.971797124886045 | bayes_pls_golite062009 |
| nucleic acid binding | 0.74904610690468 | bayes_pls_golite062009 |
| DNA binding | 0.73457854282882 | bayes_pls_golite062009 |
