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Protein Overview: gi|7270443, gi|1...

General Information:
Name(s) found: gi|7486859 [NCBI NR]
gi|7270443 [NCBI NR]
gi|5123709 [NCBI NR]
gi|15236219 [NCBI NR]
gi|14335108 [NCBI NR]
Description(s) found:
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  • pir||T10238 hypothetical protein T11I11.160 - Arabidopsis thaliana [NCBI NR]
  • gi|7270443|emb|CAB80209.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|5123709|emb|CAB45453.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15236219|ref|NP_195218.1| 1-phosphatidylinositol phosphodiesterase-related [Arabidopsis thaliana] [NCBI NR]
  • gi|14335108|gb|AAK59833.1| AT4g34920/F11I11_160 [Arabidopsis thaliana] [NCBI NR]
  • (Q9SW43) Hypothetical protein (AT4G34920/F11I11_160) [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|5123709|emb|CAB45453.1| putative protein [Arabidopsis thaliana]gi|14335108|gb|AAK59833.1| AT4g34920/F11I11_160 [Arabidopsis thaliana]gi|7486859|pir||T10238 hypothetical protein T11I11.160 - Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 1-phosphatidylinositol phosphodiesterase-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | 1-phosphatidylinositol phosphodiesterase-related | chr4:16635750-16636706 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • phospholipase C [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT4g34920/F11I11_160 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | PLC-like phosphodiesterases superfamily protein | chr4:16635745-16636701 FORWARD LENGTH=318 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • 1-phosphatidylinositol phosphodiesterase-related protein OS=Arabidopsis thaliana GN=T11I11.160 PE=2 SV=1 [ARATH-contam.fasta]
  • AT4g34920/F11I11_160 OS=Arabidopsis thaliana GN=T11I11.160 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 318 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: intracellular signaling pathway [IEA]
    lipid metabolic process [IEA]
    Molecular Function: phospholipase C activity [IEA]
    phosphoric diester hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSFFSNQID RQKDVSNEEK TLTNLEKSDG SQFPGDDYRP SDRKNWMAGL TLEKLTLNKI  60
   61 VWPGTHDSAT NDIGIPLISR PLAECQSLSI YEQLVLGTRV LDIRVQEDRQ ICHGILTSYE 120
  121 IDVVIDDVIR FLSETHSEIV ILEIRTEFGH KDPPGFETYL ADKLGQFLIH QDDSLFNKPV 180
  181 SEILPKRVIC IWKPRESPKP SRGGILWNSD YLKDNWIDTD LPWTKFQSNL KHLSEQQPTS 240
  241 SRKFFYRVEN TVTPQADNPV VWVKPVTDRI RKHARLFISQ CVSKGCGDKL QILSTDFIEG 300
  301 DFVDACVGLT HARIEGKV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..318] PSI-BLAST 53.221849 PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C FROM LISTERIA MONOCYTOGENES

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.693222330136336 bayes_pls_golite062009
  • hydrolase activity
    		•  0.17768980721334 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.05056572092175 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.0304825793447705 bayes_pls_golite062009
  • phosphoric diester hydrolase activity
    		•  0.01534375493934 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle