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Protein Overview: GATL9_ARATH

General Information:
Name(s) found: GATL9_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||F96723 hypothetical protein F20P5.18 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|2194142|gb|AAB61117.1| ESTs gb|N38288,gb|T43486,gb|AA395242 come from this gene. [Arabidopsis thaliana] [NCBI NR]
  • gi|186494322|ref|NP_001117576.1| LGT8 (GLUCOSYL TRANSFERASE FAMILY 8); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] [NCBI NR]
  • gi|18409445|ref|NP_564983.1| LGT8 (GLUCOSYL TRANSFERASE FAMILY 8); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] [NCBI NR]
  • gi|17104733|gb|AAL34255.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13878003|gb|AAK44079.1|AF370264_1 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Probable galacturonosyltransferase-like 9 OS=Arabidopsis thaliana GN=GATL9 PE=2 SV=1 [Swiss-Prot]
  • (O04536) F20P5.18 protein (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|13878003|gb|AAK44079.1| unknown protein [Arabidopsis thaliana]gi|25349431|pir||F96723 hypothetical protein F20P5.18 [imported] - Arabidopsis thalianagi|2194142|gb|AAB61117.1| ESTs gb|N38288,gb|T43486,gb|AA395242 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Glycosyl transferase family 8 protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: GATL9, LGT8 | GATL9/LGT8 (Galacturonosyltransferase-like 9); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | chr1:26404590-26405762 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • | Symbols: GATL9, LGT8 | GATL9/LGT8 (Galacturonosyltransferase-like 9) | chr1:26404590-26405762 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ESTs gb|N38288,gb|T43486,gb|AA395242 come from this gene. [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: GATL9, LGT8 | glucosyl transferase family 8 | chr1:26400927-26402099 FORWARD LENGTH=390 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 390 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: carbohydrate biosynthetic process [ISS]
    Molecular Function: transferase activity, transferring glycosyl groups [ISS]
    polygalacturonate 4-alpha-galacturonosyltransferase activity [ISS]
    transferase activity, transferring hexosyl groups [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLRFPMKSA VLAFAIFLVF IPLFSVGIRM IPGRLTAVSA TVGNGFDLGS FVEAPEYRNG  60
   61 KECVSQSLNR ENFVSSCDAS LVHVAMTLDS EYLRGSIAAV HSMLRHASCP ENVFFHLIAA 120
  121 EFDPASPRVL SQLVRSTFPS LNFKVYIFRE DTVINLISSS IRQALENPLN YARNYLGDIL 180
  181 DPCVDRVIYL DSDIIVVDDI TKLWNTSLTG SRIIGAPEYC HANFTKYFTS GFWSDPALPG 240
  241 FFSGRKPCYF NTGVMVMDLV RWREGNYREK LETWMQIQKK KRIYDLGSLP PFLLVFAGNV 300
  301 EAIDHRWNQH GLGGDNVRGS CRSLHKGPVS LLHWSGKGKP WVRLDEKRPC PLDHLWEPYD 360
  361 LYEHKIERAK DQSLFGFSSL SELTEDSSFF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] deduced N/A No confident structure predictions are available.
    2 View Details [81..390] PSI-BLAST 38.221849 apo form of a mutant of glycogenin in which Asp159 is replaced by Ser

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.3567084433464 bayes_pls_golite062009
  • transferase activity
    		•  1.04375515050786 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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