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Protein Overview: gi|12324400, gi|...

General Information:
Name(s) found: gi|42572009 [NCBI NR]
gi|25404613 [NCBI NR]
gi|18408486 [NCBI NR]
gi|12324400 [NCBI NR]
Description(s) found:
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  • gi|42572009|ref|NP_974095.1| senescence-associated family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||E96688 unknown protein, 33791-31527 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|18408486|ref|NP_564872.1| senescence-associated family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12324400|gb|AAG52167.1|AC020665_12 unknown protein; 33791-31527 [Arabidopsis thaliana] [NCBI NR]
  • (Q9C8Y4) Hypothetical protein [athaliana3702.FASTAC.txt]
  • unknown protein, 33791-31527 [imported] - Arabidopsis thalianagi|12324400|gb|AAG52167.1| unknown protein; 33791-31527 [Arabidopsis thaliana]gi|18408486|ref|NP_564872.1| senescence-associated family protein [Arabidopsis thaliana]gi|42572009|ref|NP_97409 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Senescence-associated family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | senescence-associated family protein | chr1:24733543-24735807 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein; 33791-31527 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | senescence-associated family protein | chr1:24729880-24732144 REVERSE LENGTH=417 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative senescence-associated protein OS=Arabidopsis thaliana GN=T27F4.8 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 417 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: senescence [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALNVSKVVP NSPILVKSVN ASRSRRVLLA YVHHPLAANK GSSIEELKQG LCCTKTVTFV  60
   61 SSRRCSTLCF VGKSQDTETN SQVVQKEGEK QVMPRRKSSN SSQLLVEYVS NDAKFVNERA 120
  121 RNDFVLLSRG IMRLDARARQ DVAILGSGFL KLDARAREDT EKIDRDVKRK AERLHHIATI 180
  181 FKNIAESKLK NAADKHWSDG ALEADLRRAD FRAKQRAMED ALMALEFIKN IHDMMVNKMV 240
  241 DSLVTSETGT TDRISLEKNG IALGFFPGEV SSDRISAIEE AYKSMASALS EADGIDYTDP 300
  301 EELELLVTTL IDLDAMDGKS SASLLAECSS SPDVNTRKAL ANALAAAPSM WTLGNAGMGA 360
  361 LQRLAEDSNP AIAAAASRAI NALKKQWEVE EGDSLRFMMN FERPNDDDDV DSDLDEI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..217] deduced N/A No confident structure predictions are available.
    2 View Details [218..417] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle