YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|12324400, gi\|...
Organism:	Arabidopsis thaliana
Length:	417 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12324400, gi|....

Description	E-value	Query Range	Subject Range
gi\|21555051 - gi\|21555051\|gb\|AAM63763.1\| unknown [Arabidopsis thaliana]	690.0	[0..1]	[405..1]

Back

Predicted Domain #1

Region A:
Residues: [1-217]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALNVSKVVP NSPILVKSVN ASRSRRVLLA YVHHPLAANK GSSIEELKQG LCCTKTVTFV  60
   61 SSRRCSTLCF VGKSQDTETN SQVVQKEGEK QVMPRRKSSN SSQLLVEYVS NDAKFVNERA 120
  121 RNDFVLLSRG IMRLDARARQ DVAILGSGFL KLDARAREDT EKIDRDVKRK AERLHHIATI 180
  181 FKNIAESKLK NAADKHWSDG ALEADLRRAD FRAKQRA

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [218-417]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDALMALEF IKNIHDMMVN KMVDSLVTSE TGTTDRISLE KNGIALGFFP GEVSSDRISA  60
   61 IEEAYKSMAS ALSEADGIDY TDPEELELLV TTLIDLDAMD GKSSASLLAE CSSSPDVNTR 120
  121 KALANALAAA PSMWTLGNAG MGALQRLAED SNPAIAAAAS RAINALKKQW EVEEGDSLRF 180
  181 MMNFERPNDD DDVDSDLDEI