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Protein Overview: gi|15231795, gi|...

General Information:
Name(s) found: gi|6729484 [NCBI NR]
gi|15231795 [NCBI NR]
gi|11357796 [NCBI NR]
Description(s) found:
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  • gi|6729484|emb|CAB67640.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15231795|ref|NP_190901.1| plastocyanin-like domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T45873 hypothetical protein F4P12.30 - Arabidopsis thaliana [NCBI NR]
  • (Q9LFI4) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|11357796|pir||T45873 hypothetical protein F4P12.30 - Arabidopsis thalianagi|15231795|ref|NP_190901.1| plastocyanin-like domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Plastocyanin-like domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | plastocyanin-like domain-containing protein | chr3:19783908-19784916 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • copper ion binding / electron transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | plastocyanin-like domain-containing protein | chr3:19772930-19773938 FORWARD LENGTH=310 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Plastocyanin-like domain-containing protein OS=Arabidopsis thaliana GN=F4P12_30 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 310 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: NONE FOUND
    Molecular Function: copper ion binding [IEA][ISS]
    electron carrier activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITKKIFGFV LAITILLSCC SAKIYKVGGS RGWSGKTNSW AERKEFHVGD SLIFQYHQNV  60
   61 NDVTQLSDAL KYESCNSSSP KAVYNTGHDV TFLSSMKSHV RSLHHHEARP MNGHDPLAIT 120
  121 PSPPPPSKTH ERSRPITPSP PPPSKTHEPS RPNTPPPPPP PSKTHEPSRR ITPSPPPPSK 180
  181 ILPFGKIYRV GDYGGWSVYY SYYYYKWSEG KQFHVEDTLF FQYNKELNDV REITDELEFR 240
  241 SCESTSTVAV YKTGHDLIKL TKPGVHYFVS LKTGLCQAGI KLRVTVQPST EAVTFPNVPK 300
  301 KKLSPTVNRW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..121] PSI-BLAST 27.522879 CUCUMBER BASIC PROTEIN, A BLUE COPPER PROTEIN
    2 View Details [122..182] FFAS03 1.47 Structue of V8 Protease from Staphylococcus aureus
    3 View Details [183..310] PSI-BLAST 32.221849 Crystal Structure of Mavicyanin from Cucurbita pepo medullosa (Zucchini)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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