YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15231795, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITKKIFGFV LAITILLSCC SAKIYKVGGS RGWSGKTNSW AERKEFHVGD SLIFQYHQNV  60
   61 NDVTQLSDAL KYESCNSSSP KAVYNTGHDV TFLSSMKSHV RSLHHHEARP MNGHDPLAIT 120
  121 PSPPPPSKTH ERSRPITPSP PPPSKTHEPS RPNTPPPPPP PSKTHEPSRR ITPSPPPPSK 180
  181 ILPFGKIYRV GDYGGWSVYY SYYYYKWSEG KQFHVEDTLF FQYNKELNDV REITDELEFR 240
  241 SCESTSTVAV YKTGHDLIKL TKPGVHYFVS LKTGLCQAGI KLRVTVQPST EAVTFPNVPK 300
  301 KKLSPTVNRW

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	310	0.99