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Protein Overview: gi|15228465, gi|...

General Information:
Name(s) found: gi|6735289 [NCBI NR]
gi|15228465 [NCBI NR]
gi|11290625 [NCBI NR]
Description(s) found:
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  • gi|6735289|emb|CAB68117.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15228465|ref|NP_189802.1| pectinesterase-related [Arabidopsis thaliana] [NCBI NR]
  • pir||T46110 hypothetical protein T27B3.30 - Arabidopsis thaliana [NCBI NR]
  • (Q9M2N6) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|11290625|pir||T46110 hypothetical protein T27B3.30 - Arabidopsis thalianagi|15228465|ref|NP_189802.1| pectinesterase-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Pectinesterase-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | pectinesterase-related | chr3:14325569-14326620 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Pectin lyase-like superfamily protein | chr3:14314583-14315634 FORWARD LENGTH=153 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Pectinesterase-related protein OS=Arabidopsis thaliana GN=T27B3.30 PE=3 SV=1 [ARATH-contam.fasta]
  • Pectinesterase OS=Arabidopsis thaliana GN=T27B3.30 PE=3 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 153 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IEA]
    Biological Process: cell wall modification [IEA]
    Molecular Function: pectinesterase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSYYVEEEE TNLEMCLNDN YEECHGSKSP LTRDISFLGK ENYAKQGEVL EYKGATMKEY  60
   61 NCQRLPRHEE KLDNHTLLYR GPKASRQAKP RHKFFHTNPR VVQEVLQEVT QRTSMWAGPK 120
  121 KRQAVALRIS ADATVVYRCR INAYQDTLCC SVS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..153] PSI-BLAST 35.39794 Pectin methylesterase PemA


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle