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View Structure Prediction Details

Protein: gi|15228465, gi|...
Organism: Arabidopsis thaliana
Length: 153 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15228465, gi|....

Description E-value Query
Range
Subject
Range
gi|92895238 - gi|92895238|gb|ABE92634.1| Pectinesterase [Medicago truncatula]
164.0 [0..10] [151..276]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSYYVEEEE TNLEMCLNDN YEECHGSKSP LTRDISFLGK ENYAKQGEVL EYKGATMKEY  60
   61 NCQRLPRHEE KLDNHTLLYR GPKASRQAKP RHKFFHTNPR VVQEVLQEVT QRTSMWAGPK 120
  121 KRQAVALRIS ADATVVYRCR INAYQDTLCC SVS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.39794
Match: 1gq8A
Description: Pectin methylesterase PemA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle