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Protein Overview: gi|15240970, gi|...

General Information:
Name(s) found: gi|7320718 [NCBI NR]
gi|15240970 [NCBI NR]
gi|11357964 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|7320718|emb|CAB81923.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15240970|ref|NP_195760.1| ESP4 (ENHANCED SILENCING PHENOTYPE 4); binding [Arabidopsis thaliana] [NCBI NR]
  • pir||T48162 hypothetical protein T10O8.110 - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1467 amino acids

    Gene Ontology:
    Cellular Component: mRNA cleavage and polyadenylation specificity factor complex [NAS]
    Biological Process: posttranscriptional gene silencing by RNA [IMP]
    RNA processing [IMP]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASYSRARLK DLANSAKSAT ELPPKLQRLR YMRRDLQKDD SVFPTELLPH LFDLLSDQFG  60
   61 AVRKFVAEIL GEIGLKYVEL IPEIVPLLIK SLEDETPAVA RQVIACGADL FRSTLERVAV 120
  121 QGLHSSELND LLESSWTWLI KFKDEICSVA FKQGNSGVKL CAMKFVEALI LLYTPHEGIE 180
  181 ADFNISILRG GHPVLKIGDL SIEASQKLGL LLDQLRHPAA KSLNSSTIIV LINSLSSVAK 240
  241 KRPAYCGRIL PVLLSLDPLS FLKGVYAAAT NLALKTVFLS CLKCTHPAAA PDRLTSALKE 300
  301 IEGGGQAAKA KDLFYKTNGS IQDKDSVEDT KVSVEENPLC ASSDVAESNL SRKRSGSEYN 360
  361 IDLNGDASDG KRARITPSVS EESTDGLNGN DGVSLPRVAS TSTGPSDSRG VSDSGPAQQL 420
  421 VGLFGTLVSQ GEKAIGSLEI LISSISADLL TDVVMANMHN IPPNCSSYAD GTDELVMNMC 480
  481 IVGSDAQIKY PPSFVAGVLS LSTAFPPIAA LINPHNEDEE VYSVHVDQQM FPAEDARTPP 540
  541 GLLATCDTSF PENEESNTVS PQNVHYIGNR ESGIPGLESS AQHDGSGALV TNVLSSTNVE 600
  601 AASKNQNASF SGKLLVDVIP SMSVDKLEEF SPKAVGTVAS ASQFVLPKIS APVVDLSDEE 660
  661 KDSLQKLVFL RIVEAYKQIS MSGGSQLRFS LLAHLGVEFP SELDPWKILQ EHVLSDYLNH 720
  721 EGHELTVRVL YRLYGEAEAE QDFFSSTTAA SAYESFLLTV AEALRDSFPP SDKSLSKLLG 780
  781 DSPHLPKSVL MLLESFCCPG SGEVEKDLQH GDRVTQGLSA VWSLILMRPG IRNDCLNIAL 840
  841 QSAVHHLEEI RMKAIRLVAN KLYSLSFITE QIEEFAKDRL FSVVSDDCDK MDLDLKSPPN 900
  901 KPQHSISGMS METPSEATSS STSVTEAQRC LSLYFALCTK VLRIFTILRL MTNLVFNIYK 960
  961 NASDPVKQAI HLQIPILVRT MGSSSELLKI IADPPSGSDN LLIQVLQTLT EGPTPSSELI1020
 1021 LTIRKLFDTR IKDVEILFPI LPFLPRDDVL RIFPHMVNLP MEKFQVALSR VLQGSSQSGP1080
 1081 VLSPSEALIA IHSIDPARDG IPLKQVTDAC NTCFAQRQTF TQQVLAGVLN QLVQQIPLPM1140
 1141 LFMRTVLQAI GAFPALSDFI LEILSRLVSK QIWKYPKLWV GFLKCTQTTQ PQSYKVLLQL1200
 1201 PPLQLGNALT KIPALRAPLT AHASQPEIQS SLPRSTLAVL GLVPDSQGTQ TSQVQANETQ1260
 1261 TSQEQQQQQA SEPQQTSQSQ QVSVPLSHSQ VDHQEPSQVV ASQSQSSPIG TVQSAMSQSQ1320
 1321 NSPIDTGRSE MSQSQNSPID TGRSEMSQSQ NSPIDTGRSE MSQSQNSPID TGRSEMSESQ1380
 1381 SSPIGQSQSS PIGTGQSDMS QTPQVSDSSA PEPTSHTRTS DPQASSQTLR DDDEKIDDTA1440
 1441 TSENEVTEIE KSKESSEEEE EEEEEEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..190] deduced N/A No confident structure predictions are available.
    2 View Details [191..348] deduced N/A No confident structure predictions are available.
    3 View Details [349..572] deduced N/A No confident structure predictions are available.
    4 View Details [573..798] deduced N/A No confident structure predictions are available.
    5 View Details [799..863] deduced N/A No confident structure predictions are available.
    6 View Details [864..1013] deduced N/A No confident structure predictions are available.
    7 View Details [1014..1192] deduced N/A No confident structure predictions are available.
    8 View Details [1193..1467] MSA 1.297995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle