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Protein Overview: gi|7452049, gi|4...

General Information:
Name(s) found: gi|7452049 [NCBI NR]
gi|7267976 [NCBI NR]
gi|4586251 [NCBI NR]
gi|15235464 [NCBI NR]
Description(s) found:
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  • pir||T06633 hypothetical protein T20K18.100 - Arabidopsis thaliana [NCBI NR]
  • gi|7267976|emb|CAB78317.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4586251|emb|CAB40992.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15235464|ref|NP_193011.1| sequence-specific DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • (Q9SU11) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|7267976|emb|CAB78317.1| putative protein [Arabidopsis thaliana]gi|7452049|pir||T06633 hypothetical protein T20K18.100 - Arabidopsis thalianagi|15235464|ref|NP_193011.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | sequence-specific DNA binding / transcription factor | chr4:7498006-7503640 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1108 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: regulation of transcription, DNA-dependent [IEA]
    Molecular Function: transcription factor activity [IEA]
    sequence-specific DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDLGKSLGL TLKEVRGWFK RRRSRGKGVK SMANDGLGAK NPQLYDRSLM RSSTSSRCVG  60
   61 VAVEERCIVG TRKASCQNLL PSSHILAKVF RKDGPSLGSE FDHLPSGARK ASWLGTSSVG 120
  121 QQKQKVARKR KISELMDHTS QDCIQENATV MKHGIGKGLM TVWRVMNPNR RDVSPCVDLL 180
  181 DERATLPQSS ARNPPHQKKK QRQLASILKQ KLLQKRSTEK KRRSIHREAE LNKDETQREF 240
  241 KENCELAADG EVFKETCQTI STLVDDEELE MRERHERGNP LTCSCHHPSS GSHGCFLCKG 300
  301 IAMRSSDSSL LFPDLLPKFP PNSVQMRMPF GLHPWNSSPE SVKKLFKDSL LLGKIHLSLL 360
  361 KLLLLDVETE LERGSFSNLS ISCKFLALLQ SVESQILILD MWRNSLNSLT WTELLRQILV 420
  421 AAGYGSLKCA VQSEELSKQL ASTCFVLGDR SVICGELKAL ARLYFVIDDI HMKLMKKYGL 480
  481 RLGTLKGELF RMLNGQGNNG LKISELADAP EVAVLNLATV PEERENSICS TLASDITLFE 540
  541 KISESTYRVR VNCFSEDPDK SQSDSDDSGS VDDESDDCSI SSGDEIEHVS ENPALRKVKC 600
  601 RKRRKHKSKM REVCSEIDES HPGEPWLLGL MEGEYSDLSV EEKLDVFVAL IDLLSSGSTI 660
  661 RMEDLPRAVA DCAPSIYSHG SGGKIKRSSS NQYSYPRGSW VHGGELYGIK ALSKSSDSHP 720
  721 VDSSSIVGAF AKLAGNRANN VHPMQSVYLG SDRRFNRYWL FLGTCNANDP GHRCVFFESS 780
  781 EDGHWEVINN KEALRALLSV LDDRGRREAR LIESLEKRES FLCQAMLSRQ VTQSETAHFT 840
  841 DIVREDSSSP VSDIDNNLCL NEIANDQFSS QHAAIVFEIG SKREKSLLWS LIQEFDDWIW 900
  901 ANFNFNLNSV KHRRRSYLDS LTRCKSCHDL YWRDEKHCKI CHATFEVDID LEERYAIHAA 960
  961 TCMRKEECDT FPDHKVLSSQ LQSLKAAVYA IESAMPEDAL IGAWRKSAHR LWAKRLRRSS1020
 1021 SVSEITQVIG DFVGAINEEW LWHCSDQGQT LMGEIINCFP SMPQTTSAIA LWLVKLDTLI1080
 1081 APYVEKAPPE RDQPLCRTRN TSRRASKR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..315] PSI-BLAST 11.39794 Heavy meromyosin subfragment
    2 View Details [316..562] deduced N/A No confident structure predictions are available.
    3 View Details [563..622] deduced N/A No confident structure predictions are available.
    4 View Details [623..843] MSA 1.014968 View MSA. No confident structure predictions are available.
    5 View Details [844..962] deduced N/A No confident structure predictions are available.
    6 View Details [963..1108] MSA 1.007968 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle