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Protein Overview: gi|9294300, gi|1...

General Information:
Name(s) found: gi|9294300 [NCBI NR]
gi|18404931 [NCBI NR]
gi|15293219 [NCBI NR]
gi|13430750 [NCBI NR]
Description(s) found:
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  • gi|9294300|dbj|BAB02202.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|18404931|ref|NP_566792.1| methyltransferase/ nucleic acid binding [Arabidopsis thaliana] [NCBI NR]
  • gi|15293219|gb|AAK93720.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13430750|gb|AAK25997.1|AF360287_1 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9LIN4) Hypothetical protein [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|13430750|gb|AAK25997.1| unknown protein [Arabidopsis thaliana]gi|9294300|dbj|BAB02202.1| unnamed protein product [Arabidopsis thaliana]gi|18404931|ref|NP_566792.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | methyltransferase/ nucleic acid binding | chr3:9670745-9672510 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding / N-methyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: TRM11, AtTRM11 | methyltransferases;nucleic acid binding | chr3:9669508-9671273 REVERSE LENGTH=477 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Methyltransferase / nucleic acid binding protein OS=Arabidopsis thaliana GN=At3g26410 PE=2 SV=1 [ARATH-contam.fasta]
  • Putative uncharacterized protein At3g26410 OS=Arabidopsis thaliana GN=At3g26410 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 477 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: methylation [IEA]
    Molecular Function: nucleic acid binding [IEA]
    methyltransferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWFLCVFYHR LLDFRKPEVE ALAELFGEEI AENESLQWRL PENHHNDTPF HFVQLSSEEI  60
   61 ARNIAKRSIL VKGMYELWGE GTCYEELKDS IQSYPDSRKL PFLTSDSTFR ISVETFGKAL 120
  121 TFDEQKDRIQ SFTYIPFEGR VNLKNPDHNF FLMEMIESEE NNGLQPILQR RIFFGREVGF 180
  181 ADRKLLPTFQ LKSRTYLGPT AMDAEMAFLM ANQAKATSGK LVYDPFVGTG SILVSAARFG 240
  241 AMTMGADIDI RVVRDGRGPD CNVWSNFKQY GLPMPVALLR MDNNVPPWRS GLKEIFDAII 300
  301 CDPPYGVRAG GRKSGGRKIL RGTVDPYTVP DDKRTDHIPS TGAYSLVECV HDLLHLAARM 360
  361 LVMKGRLVFF FPVLRDETGS EVKFPEHPCF KLVAVSEQIL SSRYSRVLLT MVKVEPYSEE 420
  421 VEEAARLMHL EFRENHLKWL EDGNIHSSIF KPIDSSQIDT DSKAFKDPKP KYRGKYV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..477] PSI-BLAST 26.154902 No description for 2okcA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • tRNA (adenine)-methyltransferase activity
    		•  8.68185118956881 bayes_pls_golite062009
  • tRNA (adenine-N1-)-methyltransferase activity
    		•  8.68185118956881 bayes_pls_golite062009
  • tRNA methyltransferase activity
    		•  7.81931840222208 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  7.024459985818 bayes_pls_golite062009
  • methyltransferase activity
    		•  4.15445027778357 bayes_pls_golite062009
  • N-methyltransferase activity
    		•  4.07806017452628 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  4.07153733729662 bayes_pls_golite062009
  • protein methyltransferase activity
    		•  3.92746815303714 bayes_pls_golite062009
  • RNA methyltransferase activity
    		•  3.07428840534971 bayes_pls_golite062009
  • histone methyltransferase activity
    		•  2.99461585647365 bayes_pls_golite062009
  • transferase activity
    		•  2.926540904444 bayes_pls_golite062009
  • arginine N-methyltransferase activity
    		•  2.41876112831625 bayes_pls_golite062009
  • protein-arginine N-methyltransferase activity
    		•  2.41876112831625 bayes_pls_golite062009
  • rRNA methyltransferase activity
    		•  2.29640050660273 bayes_pls_golite062009
  • DNA-methyltransferase activity
    		•  2.18991764495147 bayes_pls_golite062009
  • histone-arginine N-methyltransferase activity
    		•  2.04296107639729 bayes_pls_golite062009
  • tRNA (cytosine-5-)-methyltransferase activity
    		•  1.88889414729709 bayes_pls_golite062009
  • tRNA (cytosine)-methyltransferase activity
    		•  1.88889414729709 bayes_pls_golite062009
  • protein-arginine omega-N monomethyltransferase activity
    		•  1.66871163498737 bayes_pls_golite062009
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • histone methyltransferase activity (H4-R3 specific)
    		•  1.1103522853299 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.914549843668268 bayes_pls_golite062009
  • protein-arginine omega-N asymmetric methyltransferase activity
    		•  0.89325812193225 bayes_pls_golite062009
  • DNA binding
    		•  0.86027591375666 bayes_pls_golite062009
  • site-specific DNA-methyltransferase (adenine-specific) activity
    		•  0.703178429468566 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.616949327277483 bayes_pls_golite062009
  • rRNA (adenine) methyltransferase activity
    		•  0.533090627724779 bayes_pls_golite062009
  • rRNA (adenine-N6,N6-)-dimethyltransferase activity
    		•  0.455449410561251 bayes_pls_golite062009
  • RNA binding
    		•  0.417524996559564 bayes_pls_golite062009
  • binding
    		•  0.383237930789959 bayes_pls_golite062009
  • protein-arginine omega-N symmetric methyltransferase activity
    		•  0.364369105571521 bayes_pls_golite062009
  • tRNA (guanine) methyltransferase activity
    		•  0.203168546434167 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle