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Protein Overview: gi|7485885, gi|7...

General Information:
Name(s) found: gi|7485885 [NCBI NR]
gi|7270852 [NCBI NR]
gi|4467156 [NCBI NR]
gi|20147101 [NCBI NR]
gi|17979229 [NCBI NR]
gi|15234016 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • pir||T05697 hypothetical protein F20M13.250 - Arabidopsis thaliana [NCBI NR]
  • gi|7270852|emb|CAB80533.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4467156|emb|CAB37525.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20147101|gb|AAM10267.1| AT4g38690/F20M13_250 [Arabidopsis thaliana] [NCBI NR]
  • gi|17979229|gb|AAL49931.1| AT4g38690/F20M13_250 [Arabidopsis thaliana] [NCBI NR]
  • gi|15234016|ref|NP_195581.1| 1-phosphatidylinositol phosphodiesterase-related [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 318 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: intracellular signaling pathway [IEA]
    lipid metabolic process [IEA]
    Molecular Function: phospholipase C activity [IEA]
    phosphoric diester hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSHLSKQLE RRKAISTEKK ALTDLEKSCG CEFPGCDYMP SDRKNWMAGV GPEKLHINKI  60
   61 VWPGTHDSAT NKIGIRFVSR PFAKCQSLSI YNQLVAGTRV LDIRVQEDRR VCHGILKTYS 120
  121 VDVVLADLKR FLSETESEIV ILEIRTEFGH EDPPEFDKYL VEQLGEHLIH QDDHVFSKTV 180
  181 AELLPKRVIC VWKPRKSPQP KHGDPLWSAG YLKDNWIDTD LPSTKFESNI KHLSQQQPAT 240
  241 SRKFFYRVEN TVTPQPDNPI MCVKPVTKRI HCYAKVFIIE CVKRGCADKL QIFSTDFIDN 300
  301 EFVDACVGLT FARAEGKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..318] PSI-BLAST 47.69897 No description for 2fjuB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.693222330136336 bayes_pls_golite062009
  • hydrolase activity
    		•  0.17768980721334 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.05056572092175 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.0304825793447705 bayes_pls_golite062009
  • phosphoric diester hydrolase activity
    		•  0.01534375493934 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle