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Protein Overview: gi|7486357, gi|5...

General Information:
Name(s) found: gi|7486357 [NCBI NR]
gi|7267597 [NCBI NR]
gi|53749168 [NCBI NR]
gi|5262154 [NCBI NR]
gi|16209707 [NCBI NR]
gi|15234038 [NCBI NR]
Description(s) found:
Found 17 descriptions.
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  • pir||T10540 hypothetical protein F3I3.20 - Arabidopsis thaliana [NCBI NR]
  • gi|7267597|emb|CAB80909.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|53749168|gb|AAU90069.1| At4g01000 [Arabidopsis thaliana] [NCBI NR]
  • gi|5262154|emb|CAB45783.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|16209707|gb|AAL14410.1| AT4g01000/F3I3_20 [Arabidopsis thaliana] [NCBI NR]
  • gi|15234038|ref|NP_192009.1| ubiquitin family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 415 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein modification process [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADQSSKPLQ FFVRLLDGKS LTLSFSSPLA YGEQIKQRIF EQTKIPTHLQ RLISGGYQIS  60
   61 DGSAISQPDA TVNLVLSLRG GKGGFGSLLR GGGMKAGQKK TNNFDACRDM SGRRLRHVNA 120
  121 ENRLQEWKDG EEGRNLEKKA LEYLKKQSNK VKQGVGNGAT QKYVNKYKEE SDKCILAVDL 180
  181 ALNESFKNGK RKAKIGAESE KKKRLKIWKG KRAVEDSDSD DSDDEEDEKS VVLNNGGHDG 240
  241 DSSGKSSCNS GSEEENDAVM HRSFDVVKEE ITGVQGIIEE EMNDLPVSVA VDDANTVADE 300
  301 MDQLEKVEKS SGDAGKNLVD VACETLITSA AVKREGTAKE TVSVDAVCCK PVEPLNFDDF 360
  361 NSPADMEVLG MERLKTELQS RGLKCGGTLR ERAARLFLLK STPLDKLPKK LLAKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..81] PSI-BLAST 27.39794 No description for 2ojrA was found.
    2 View Details [82..255] MSA 4.112997 View MSA. No confident structure predictions are available.
    3 View Details [256..326] MSA 2.034997 View MSA. No confident structure predictions are available.
    4 View Details [327..415] MSA 5.027994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle