YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|11357811, gi|...

General Information:
Name(s) found: gi|9755722 [NCBI NR]
gi|15237397 [NCBI NR]
gi|11357811 [NCBI NR]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • gi|9755722|emb|CAC01834.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15237397|ref|NP_197172.1| glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T51502 hypothetical protein F5E19_40 - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 488 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    cation binding [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARSFYFCLF FLFISSTSKL TTSYPLSTKS RWIVDEKGQR VKLACVNWPA HLQPTVAEGL  60
   61 SKQPLDSISK KIVSMGFNCV RLTWPLDLVT NDTLALKVTV KQSFESLKLF EDVLGIQTHN 120
  121 PKLLHLPLFN AFQEVVSNLG ENGVMVILDN HLTTPGWCCG DNDLDAFFGY PHFDPLVWAK 180
  181 GLRKMATLFR NFTHVIGMSL RNEPRGARDY PDLWFRHMPQ GAEAVHAANP KLLVILSGID 240
  241 FDTNLSFLRD RSVNVSFTDK LVFELHWYSF SDGRDSWRKH NSNDFCVKII EKVTHNGGFL 300
  301 LGRGFPLILS EFGTDQRGGD MSGNRYMNCL VAWAAENDLD WAVWALTGDY YLRTGPGLRP 360
  361 NKNLLFHPST GLCVTNNPSD NIPTLRLGPC PKSDPWTFNP SEGILWINKM CVEAPNVVGQ 420
  421 KVKLGVGTKC SKLGQISATK MHLSFKTSNG LLLCLDVDER DNSVVANRCK FLTMDASCDP 480
  481 ASQWFKVL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..378] PSI-BLAST 39.0 Endocellulase e1 from acidothermus cellulolyticus mutant y245g
    2 View Details [379..488] FFAS03 1.42 Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.32563207632796 bayes_pls_golite062009
  • hydrolase activity
    		•  0.85514037342026 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.80912338090552 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.41375210927547 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle