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Protein Overview: OSB2_ARATH

General Information:
Name(s) found: OSB2_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T04885 hypothetical protein F18F4.110 - Arabidopsis thaliana [NCBI NR]
  • gi|7268796|emb|CAB79001.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|2827655|emb|CAA16609.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18415421|ref|NP_567593.1| PTAC9 (PLASTID TRANSCRIPTIONALLY ACTIVE 9); single-stranded DNA binding [Arabidopsis thaliana] [NCBI NR]
  • gi|111074390|gb|ABH04568.1| At4g20010 [Arabidopsis thaliana] [NCBI NR]
  • Protein OSB2, chloroplastic OS=Arabidopsis thaliana GN=OSB2 PE=1 SV=2 [Swiss-Prot]
  • (O49428) Hypothetical protein [athaliana3702.FASTAC.txt]
  • hypothetical protein [Arabidopsis thaliana]gi|2827655|emb|CAA16609.1| hypothetical protein [Arabidopsis thaliana]gi|7485726|pir||T04885 hypothetical protein F18F4.110 - Arabidopsis thalianagi|18415421|ref|NP_567593.1| expressed protein [Arabidopsis tha [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: PTAC9, OSB2 | OSB2/PTAC9 (PLASTID TRANSCRIPTIONALLY ACTIVE9); single-stranded DNA binding | chr4:10842138-10843999 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At4g20010 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: PTAC9, OSB2 | plastid transcriptionally active 9 | chr4:10842128-10843989 FORWARD LENGTH=371 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 371 amino acids

    Gene Ontology:
    Cellular Component: nucleoid [IDA]
    plastid chromosome [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: single-stranded DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLISKSLAR IECSPFFYPR ASEITTGKRI TSPQIRLYTA AAVGGKTGNG ERKQRAKAPA  60
   61 KTPEAVTPVK PLEIASVTAT TENELPRPNE IAYESEVANW VNLIGFVDQP VQFEASSDGK 120
  121 FWAGTVISQR SASDSSGFWI PIIFEGDLAK TAARYVSKDD QIHVSGKLFI DSPPPNMTYA 180
  181 QANVQVLVQN LNFIQPMSPS PSPFMVMSSS EKEESGIKKQ PARAKQDIVI DEASDSWNHL 240
  241 IENPKEWWDH RENKVNGLVK PRHPDFKSKD SSFSLWLNKA PNWVLPKLEG LEFDVLVPKA 300
  301 RVVKQLKGEE SWKDLVQNPD KWWDNRIDKR NAKAPDFKHK ETGEALWLNE SPTWVLPKLP 360
  361 PVKKKQESIV F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..249] PSI-BLAST 32.522879 Structure of single-stranded DNA-binding protein (SSB) from D. radiodurans
    2 View Details [250..371] MSA 1.011977 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.141433535514844 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle