YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|6682229, gi|1...

General Information:
Name(s) found: gi|6682229 [NCBI NR]
gi|15232691 [NCBI NR]
gi|119360093 [NCBI NR]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • gi|6682229|gb|AAF23281.1|AC016661_6 hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15232691|ref|NP_187560.1| chloroplast lumen common family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|119360093|gb|ABL66775.1| At3g09490 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 334 amino acids

    Gene Ontology:
    Cellular Component: chloroplast thylakoid lumen [ISS]
    Biological Process: photosynthesis, light reaction [TAS]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPATFQFS RTKLNLQINL VERKSPSKLS FPLLFRDQAK STPIRFPVIR ASSSSSASNH  60
   61 KPSLLKTTFI SLTAAAALFS ASFYFVNKRA AMTPVAVVET TLEKHLETQS NDVNALSLLT 120
  121 EIKFKSDKHE QAIVFLDRLI EIEPYERKWP AMKARILSYH GKSESAIEAF EEILEKDPIR 180
  181 VDAYHYLVME YYNSKPKLTE IEKRINKVIR RCKKEKKTKE ILGFRMLIAQ IRFIEGKSVE 240
  241 AIRICEELVK EDPNDFTIYL FQGVVYTLMN KGEEAAKQFE HVARVIPRNH PSRETAARTT 300
  301 NSNEWRVIVA YDNVYCYLST FARLSMASLF NKFG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..334] PSI-BLAST 48.522879 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.02652482814057 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle