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Protein Overview: YODA_ARATH

General Information:
Name(s) found: YODA_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 883 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: embryonic development ending in seed dormancy [IMP]
    stomatal complex morphogenesis [IMP]
    Molecular Function: ATP binding [IEA]
    protein kinase activity [IEA]
    protein serine/threonine kinase activity [IEA]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPWWSKSKDE KKKTNKESII DAFNRKLGFA SEDRSSGRSR KSRRRRDEIV SERGAISRLP  60
   61 SRSPSPSTRV SRCQSFAERS PAVPLPRPIV RPHVTSTDSG MNGSQRPGLD ANLKPSWLPL 120
  121 PKPHGATSIP DNTGAEPDFA TASVSSGSSV GDIPSDSLLS PLASDCENGN RTPVNISSRD 180
  181 QSMHSNKNSA EMFKPVPNKN RILSASPRRR PLGTHVKNLQ IPQRDLVLCS APDSLLSSPS 240
  241 RSPMRSFIPD QVSNHGLLIS KPYSDVSLLG SGQCSSPGSG YNSGNNSIGG DMATQLFWPQ 300
  301 SRCSPECSPV PSPRMTSPGP SSRIQSGAVT PLHPRAGGST TGSPTRRLDD NRQQSHRLPL 360
  361 PPLLISNTCP FSPTYSAATS PSVPRSPARA EATVSPGSRW KKGRLLGMGS FGHVYLGFNS 420
  421 ESGEMCAMKE VTLCSDDPKS RESAQQLGQE ISVLSRLRHQ NIVQYYGSET VDDKLYIYLE 480
  481 YVSGGSIYKL LQEYGQFGEN AIRNYTQQIL SGLAYLHAKN TVHRDIKGAN ILVDPHGRVK 540
  541 VADFGMAKHI TAQSGPLSFK GSPYWMAPEV IKNSNGSNLA VDIWSLGCTV LEMATTKPPW 600
  601 SQYEGVPAMF KIGNSKELPD IPDHLSEEGK DFVRKCLQRN PANRPTAAQL LDHAFVRNVM 660
  661 PMERPIVSGE PAEAMNVASS TMRSLDIGHA RSLPCLDSED ATNYQQKGLK HGSGFSISQS 720
  721 PRNMSCPISP VGSPIFHSHS PHISGRRSPS PISSPHALSG SSTPLTGCGG AIPFHHQRQT 780
  781 TVNFLHEGIG SSRSPGSGGN FYTNSFFQEP SRQQDRSRSS PRTPPHVFWD NNGSIQPGYN 840
  841 WNKDNQPVLS DHVSQQLLSE HLKLKSLDLR PGFSTPGSTN RGP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] deduced N/A No confident structure predictions are available.
    2 View Details [136..252] deduced N/A No confident structure predictions are available.
    3 View Details [253..660] PSI-BLAST 58.30103 No description for 2j0jA was found.
    4 View Details [661..714] PSI-BLAST 89.69897 No description for 2qnjA was found.
    5 View Details [715..883] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle