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Protein Overview: AGD6_ARATH

General Information:
Name(s) found: AGD6_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Probable ADP-ribosylation factor GTPase-activating protein AGD6 OS=Arabidopsis thaliana GN=AGD6 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 459 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][ISS]
    cytosol [IDA]
    Biological Process: regulation of ARF GTPase activity [IEA]
    Molecular Function: DNA binding [ISS]
    zinc ion binding [IEA]
    ARF GTPase activator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATRQLRTL QSQPENKVCV DCAQKNPQWA SVSYGIFMCL ECSGKHRGLG VHISFVRSVT  60
   61 MDSWSAIQIK KMEAGGNERL NKFFAQYGIA KETDIISKYN SNAASVYRDR IQALAEGRPW 120
  121 NDPPVVKEAN KKPPLAQGGY GNNNNNNNGG WDSWDNDDSY KSDMRRNQSA NDFRASGNRE 180
  181 GAHVKSKSSE DIYTRSQLEA SAAGKESFFA RRMAENESKP EGLPPSQGGK YVGFGSSSAP 240
  241 PPRNNQQDDV FSVVSQGFGR LSLVAASAAQ SAASVVQTGT KEFTSKVKEG GYDHKVSETV 300
  301 NVVANKTTEI GHRTWGIMKG VMAMATQKVE EFTKEGSTSW NQQSENEGNG YYQNFGNGNK 360
  361 AANSSVGGGR PQSSSTSGHY NNSQNSNSWD SWGENENKKT EAVAPKGSSA SNDDDGWTGW 420
  421 DDHDAKDDGF DGHYQSAGDK KSAGHNGKSD TAWTGGGFL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] PSI-BLAST 42.0 No description for 2iqjA was found.
    2 View Details [126..235] deduced N/A No confident structure predictions are available.
    3 View Details [236..459] MSA 5.257997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle