Protein Overview: SC13A_ARATH

General Information:
Name(s) found:	SC13A_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|79295394\|ref\|NP_001030616.1\| protein transport protein SEC13 family protein / WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR] gi\|6094550\|gb\|AAF03492.1\|AC010676_2 putative protein transport protein SEC13 [Arabidopsis thaliana] [NCBI NR] gi\|17104729\|gb\|AAL34253.1\| putative transport protein SEC13 [Arabidopsis thaliana] [NCBI NR] gi\|15232095\|ref\|NP_186783.1\| protein transport protein SEC13 family protein / WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR] gi\|13877999\|gb\|AAK44077.1\|AF370262_1 putative transport protein SEC13 [Arabidopsis thaliana] [NCBI NR] Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana GN=SEC13A PE=1 SV=1 [Swiss-Prot] (Q9SRI1) Hypothetical protein (Putative transport protein SEC13) [athaliana3702.FASTAC.txt] putative protein transport protein SEC13 [Arabidopsis thaliana]gi\|17104729\|gb\|AAL34253.1\| putative transport protein SEC13 [Arabidopsis thaliana]gi\|13877999\|gb\|AAK44077.1\| putative transport protein SEC13 [Arabidopsis thaliana]gi\|15232095\|ref\|NP_186783 [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Protein transport protein SEC13 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: \| protein transport protein SEC13 family protein / WD-40 repeat family protein \| chr3:127564-128472 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] nucleotide binding [Arabidopsis thaliana] [nr-271106-contam.fasta] putative transport protein SEC13 [Arabidopsis thaliana] [nr-271106-contam.fasta] putative protein transport protein SEC13 [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: \| Transducin/WD40 repeat-like superfamily protein \| chr3:127557-128465 REVERSE LENGTH=302 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta] Putative transport protein SEC13 OS=Arabidopsis thaliana GN=T22N4.3 PE=2 SV=1 [ARATH-contam.fasta]
Organism:	Arabidopsis thaliana
Length:	302 amino acids
Gene Ontology:
Cellular Component:	cellular_component [ND]
Biological Process:	membrane budding [ISS] intracellular protein transport [ISS]
Molecular Function:	nucleotide binding [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPQKIETGH SDTIHDVVMD YYGKRVATAS SDCTIKITGV SNSGGSQHLA TLTGHRGPVW  60
   61 QVAWAHPKFG SLLASCSYDG QIILWKEGNQ NQWTQAHVFT DHKVSVNSIA WAPHELGLSL 120
  121 ACGASDGNIS VFSARADGGW DTTKIDQAHP VGVTSVSWAP ATEPGALVSS GMIDPVYKLA 180
  181 SGGCDSTVKV WKFSNGSWKM DCFPALNKHT DWVRDVAWAP NLGLPKSTIA SGSEDGKVII 240
  241 WTIGKEGEQW EGTVLKDFKT PVWRVSWSLT GNLLAVSDGN NNVTVWKESV DGEWEQVTVV 300
  301 EP

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..302]	PSI-BLAST	47.39794	No description for 2pm6B was found.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: SC13A_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: