YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|11358053, gi|...

General Information:
Name(s) found: gi|6996299 [NCBI NR]
gi|53749154 [NCBI NR]
gi|19715609 [NCBI NR]
gi|15231723 [NCBI NR]
gi|11358053 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|6996299|emb|CAB75460.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|53749154|gb|AAU90062.1| At3g59630 [Arabidopsis thaliana] [NCBI NR]
  • gi|19715609|gb|AAL91627.1| AT3g59630/T16L24_180 [Arabidopsis thaliana] [NCBI NR]
  • gi|15231723|ref|NP_191522.1| diphthamide synthesis DPH2 family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T49304 hypothetical protein T16L24.180 - Arabidopsis thaliana [NCBI NR]
  • (Q9M1A5) Hypothetical protein (AT3g59630/T16L24_180) [athaliana3702.FASTAC.txt]
  • At3g59630 [Arabidopsis thaliana]gi|6996299|emb|CAB75460.1| putative protein [Arabidopsis thaliana]gi|19715609|gb|AAL91627.1| AT3g59630/T16L24_180 [Arabidopsis thaliana]gi|11358053|pir||T49304 hypothetical protein T16L24.180 - Arabidopsis thalianagi|15 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Diphthamide synthesis DPH2 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | diphthamide synthesis DPH2 family protein | chr3:22036332-22038753 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At3g59630 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT3g59630/T16L24_180 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | diphthamide synthesis DPH2 family protein | chr3:22025355-22027776 REVERSE LENGTH=491 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT3g59630/T16L24_180 OS=Arabidopsis thaliana GN=T16L24.180 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 491 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELEFESKYE INRTAEFIIS KSFTRIALQF PDELLKDSTK VVSALKSKTR LLTDREVRFF  60
   61 VMADTTYGSC CIDEVGALHI DSECVVHYGQ TCLSPTSVLP AFFVFGKASI NVSSCVKHLI 120
  121 DYASKSDKPI MILYGLEYAH VIPQIREELG LSKTDSQLSV ANVLCSFISP SKDPRESMEH 180
  181 PRPYSESDSS DSLSSSRSYR LGGLTWDLPE GSKIEDYLLF WIGSDSSAFA NVVLTFNGCD 240
  241 IVRYDAEEDS LVTEFYQQRR ILKRRYYLVE KAKDANIIGI LVGTLGVAGY LHMIHHMQAL 300
  301 ISAAGKKSYI LAMGRPNPAK LANFPECDVF IYISCAQTAL LDSKEFMSPV ITPFEANLAF 360
  361 SRGSEWTGAY LMHFQDVINS VKSESEAHIG SEEPRFSFFQ GGYVEDHKTN DQAKNGEEDT 420
  421 GETMTLVQAA EKALQLRGND HNSLTKQTAA KSGPEYFLNR VYRGLEINSE NTLPEPYIVG 480
  481 RSGKASGYKH E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..134] MSA 6.103984 View MSA. No confident structure predictions are available.
    2 View Details [135..225] deduced N/A No confident structure predictions are available.
    3 View Details [226..388] MSA 2.106983 View MSA. No confident structure predictions are available.
    4 View Details [389..491] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.67

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle