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Protein Overview: TLP10_ARATH

General Information:
Name(s) found: TLP10_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75262876|sp|Q9FRH7.1|TLP10_ARATH RecName: Full=Tubby-like F-box protein 10; Short=AtTLP10; AltName: Full=SKP1-interacting partner 26 [NCBI NR]
  • gi|33320973|gb|AAQ06244.1|AF487271_1 tubby-like protein TULP10 [Arabidopsis thaliana] [NCBI NR]
  • pir||E86382 hypothetical protein F4F7.33 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15222543|ref|NP_173899.1| AtTLP10 (TUBBY LIKE PROTEIN 10); phosphoric diester hydrolase/ transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|11067277|gb|AAG28805.1|AC079374_8 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1 [Swiss-Prot]
  • (Q9FRH7) Hypothetical protein [athaliana3702.FASTAC.txt]
  • tubby-like protein TULP10 [Arabidopsis thaliana]gi|25518577|pir||E86382 hypothetical protein F4F7.33 [imported] - Arabidopsis thalianagi|11067277|gb|AAG28805.1| unknown protein [Arabidopsis thaliana]gi|15222543|ref|NP_173899.1| F-box family protein / t [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 F-box family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AtTLP10 | AtTLP10 (TUBBY LIKE PROTEIN 10); phosphoric diester hydrolase/ transcription factor | chr1:8864948-8866595 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • phosphoric diester hydrolase/ transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • tubby-like protein TULP10 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: AtTLP10, TLP10 | tubby like protein 10 | chr1:8864961-8866608 FORWARD LENGTH=445 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 445 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: regulation of transcription [TAS]
    Molecular Function: transcription factor activity [ISS]
    phosphoric diester hydrolase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFRGIVQDL RDGFGSLSRR SFDFRLSSLH KGKAQGSSFR EYSSSRDLLS PVIVQTSRWA  60
   61 NLPPELLFDV IKRLEESESN WPARKHVVAC ASVCRSWRAM CQEIVLGPEI CGKLTFPVSL 120
  121 KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD 180
  181 ADNISRSSNS YLGKLRSNFL GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP 240
  241 SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF 300
  301 RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL 360
  361 NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP EQDKVILQFG KVGKDMFTMD 420
  421 YRYPLSAFQA FAICLSSFDT KLACE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] FFAS03 1.77 No description for 2e31A was found.
    2 View Details [121..445] PSI-BLAST 106.0 Transcriptional factor tubby, C-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle