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Protein Overview: URT1_ARATH

General Information:
Name(s) found: URT1_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • UTP:RNA uridylyltransferase 1 OS=Arabidopsis thaliana GN=URT1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 764 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: nucleotidyltransferase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADGGAEPPA PPSSINAGEF LLSILHGSPS PSSQGPQHHQ SFALDPAIAA IGPTVNNPFP  60
   61 PSNWQSNGHR PSNHNPPSWP LAFSPPHNLS PNFLGFPQFP PSPFTTNQFD GNQRVSPEDA 120
  121 YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS 180
  181 NQHEQLMRHP QSTLSNSNMD PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP 240
  241 PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN 300
  301 ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG 360
  361 NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR EKESRVDNRG QRLLGQKARM 420
  421 VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS 480
  481 CANSFGFPKS DIDVCLAIEG DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP 540
  541 VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA 600
  601 YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV 660
  661 WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND RHLICIEDPF ETSHDLGRVV 720
  721 DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] MSA 12.143997 View MSA. No confident structure predictions are available.
    2 View Details [143..405] MSA 1.26198 View MSA. No confident structure predictions are available.
    3 View Details [406..764] PSI-BLAST 53.0 Poly(A) polymerase, middle domain; Poly(A) polymerase N-terminal, catalytic domain; Poly(A) polymerase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.222270543382941 bayes_pls_golite062009
  • transferase activity
    		•  0.00393984128503999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle