| Protein: | URT1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 764 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for URT1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
314.0 | [0..189] | [760..28] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MADGGAEPPA PPSSINAGEF LLSILHGSPS PSSQGPQHHQ SFALDPAIAA IGPTVNNPFP 60
61 PSNWQSNGHR PSNHNPPSWP LAFSPPHNLS PNFLGFPQFP PSPFTTNQFD GNQRVSPEDA 120
121 YRLGFPGTTN PAIQSMVQQQ QQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [143-405] |
1 11 21 31 41 51
| | | | | |
1 QQLPPPQSET RKLVFGSFSG DATQSLNGLH NGNLKYDSNQ HEQLMRHPQS TLSNSNMDPN 60
61 LSHHRNHDLH EQRGGHSGRG NWGHIGNNGR GLKSTPPPPP PGFSSNQRGW DMSLGSKDDD 120
121 RGMGRNHDQA MGEHSKVWNQ SVDFSAEANR LRGLSIQNES KFNLSQQIDH PGPPKGASLH 180
181 SVSAADAADS FSMLNKEARR GGERREELGQ LSKAKREGNA NSDEIEDFGE DIVKSLLLED 240
241 ETGEKDANDG KKDSKTSREK ESR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [406-764] |
1 11 21 31 41 51
| | | | | |
1 VDNRGQRLLG QKARMVKMYM ACRNDIHRYD ATFIAIYKSL IPAEEELEKQ RQLMAHLENL 60
61 VAKEWPHAKL YLYGSCANSF GFPKSDIDVC LAIEGDDINK SEMLLKLAEI LESDNLQNVQ 120
121 ALTRARVPIV KLMDPVTGIS CDICINNVLA VVNTKLLRDY AQIDVRLRQL AFIVKHWAKS 180
181 RRVNETYQGT LSSYAYVLMC IHFLQQRRPP ILPCLQEMEP TYSVRVDNIR CTYFDNVDRL 240
241 RNFGSNNRET IAELVWGFFN YWAYAHDYAY NVVSVRTGSI LGKREKDWTR RVGNDRHLIC 300
301 IEDPFETSHD LGRVVDKFSI RVLREEFERA ARIMHQDPNP CAKLLEPYIP EDNNGQGHN
|
| Detection Method: | |
| Confidence: | 53.0 |
| Match: | 1f5aA |
| Description: | Poly(A) polymerase, middle domain; Poly(A) polymerase N-terminal, catalytic domain; Poly(A) polymerase, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.222270543382941 | bayes_pls_golite062009 |
| transferase activity | 0.00393984128503999 | bayes_pls_golite062009 |
