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Protein Overview: gi|15236182, gi|...

General Information:
Name(s) found: gi|7486784 [NCBI NR]
gi|7269490 [NCBI NR]
gi|4468104 [NCBI NR]
gi|15236182 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • pir||T05066 hypothetical protein M3E9.190 - Arabidopsis thaliana [NCBI NR]
  • gi|7269490|emb|CAB79493.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4468104|emb|CAA18232.2| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15236182|ref|NP_194368.1| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1016 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: intracellular signaling pathway [IEA]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSESELMIS LISQLLSILG GGEDTHTPQL KSKLIALTCQ LISLVNSLDL DSQPEPESKL  60
   61 KSLIKQIIYV SNSVSEPGPE SQSVSVVTKM ISIIGSIDFD LKESEPELMS LTSQIFALIM 120
  121 AMDEESELFS LLSEVASLVQ TEEQKLINNQ QVPPLTTEEE EKDDLIYGYT DDMNWESELM 180
  181 FYIISKMIST LRGEDMCQEV ARDFIAYANQ LIPLIESLDM DSNSEPKQEP KITSLVRQII 240
  241 SLSKVVSGPE SQLVSLVTRI ISITSSTDLD PTESQWRLTS VTYKISRILK EIKDSEDSEM 300
  301 ASLINQIHDL VDAEEGRKPE SRLISSITQL MSHINSWSFY SGMDPKIISL IIRIIYLVRS 360
  361 MDLDSQTKPK SELMSLVTQT IAVYNSMDLD SQPRPLRKVV SVFSQYGFDV NSTVSDSESD 420
  421 SSENYVSHIK DSLKLEPEPE LISFIHRIGS LVISMNPNWE KLISFCPQFE VILSDDGKFQ 480
  481 VEEGRLSKNQ LSDDIPMKWN CLQVNWNLLK LHAGEKDFTH FRCRGCNGDN HKENEKAPLE 540
  541 VKHPLHPKHP LQLVLSQSSG GRTRECYCCD EDLLHIFYCC LACNFSMNVA CTKKPAVLYR 600
  601 NHPRWHEHTL ALFPRQASLT CNLCALADSS SPIYMCPPCD FVVHLRCTGL PRVIKISRHL 660
  661 HRISFTFSFD RGDLSCSVCR RKIDEDYGGY TCIKDGCSYA AHSKCATQKN VWDGIELEGE 720
  721 PEEVEEEVVD PFVTISDGVI QHFGHPQHHL RLDENTSRDY DEDKLCQACV MPIYFGNFYS 780
  781 CTQCNYILHE ACANFSRKMH HPVHPHVLTL VNSDGAINVR KECAACPWMC TTGFFYECSK 840
  841 EDFQLHVQCA NLSEPLVHES HMHPLFLTSK PGERRLCSAC KESYFSVTRE TFNCIECDFA 900
  901 LCFRCATLPQ KVRYKHDKHM LTLSYGEETS TMTYWCEVCE RNLNPKERFY KCDEYCSITL 960
  961 HIECMLGVAL YIRPGSSWIC FNNKKILIKM KAKKVAYTGI EPVTFALLAR RSNQLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] deduced N/A No confident structure predictions are available.
    2 View Details [161..275] PSI-BLAST 5.154902 Mammalian SCAN domain dimer is a domain-swapped homologue of the HIV capsid C-terminal domain
    3 View Details [276..555] deduced N/A No confident structure predictions are available.
    4 View Details [556..737] PSI-BLAST 52.0 No description for 2i13A was found.
    5 View Details [738..804] PSI-BLAST 15.69897 No description for 2ebtA was found.
    6 View Details [805..917] PSI-BLAST 4.30103 No description for 2dlkA was found.
    7 View Details [918..1016] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle