| Protein: | gi|15236182, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 1016 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for gi|15236182, gi|....
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MDSESELMIS LISQLLSILG GGEDTHTPQL KSKLIALTCQ LISLVNSLDL DSQPEPESKL 60
61 KSLIKQIIYV SNSVSEPGPE SQSVSVVTKM ISIIGSIDFD LKESEPELMS LTSQIFALIM 120
121 AMDEESELFS LLSEVASLVQ TEEQKLINNQ QVPPLTTEEE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [161-275] |
1 11 21 31 41 51
| | | | | |
1 EKDDLIYGYT DDMNWESELM FYIISKMIST LRGEDMCQEV ARDFIAYANQ LIPLIESLDM 60
61 DSNSEPKQEP KITSLVRQII SLSKVVSGPE SQLVSLVTRI ISITSSTDLD PTESQ
|
| Detection Method: | |
| Confidence: | 5.154902 |
| Match: | 1y7qA |
| Description: | Mammalian SCAN domain dimer is a domain-swapped homologue of the HIV capsid C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [276-555] |
1 11 21 31 41 51
| | | | | |
1 WRLTSVTYKI SRILKEIKDS EDSEMASLIN QIHDLVDAEE GRKPESRLIS SITQLMSHIN 60
61 SWSFYSGMDP KIISLIIRII YLVRSMDLDS QTKPKSELMS LVTQTIAVYN SMDLDSQPRP 120
121 LRKVVSVFSQ YGFDVNSTVS DSESDSSENY VSHIKDSLKL EPEPELISFI HRIGSLVISM 180
181 NPNWEKLISF CPQFEVILSD DGKFQVEEGR LSKNQLSDDI PMKWNCLQVN WNLLKLHAGE 240
241 KDFTHFRCRG CNGDNHKENE KAPLEVKHPL HPKHPLQLVL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [556-737] |
1 11 21 31 41 51
| | | | | |
1 SQSSGGRTRE CYCCDEDLLH IFYCCLACNF SMNVACTKKP AVLYRNHPRW HEHTLALFPR 60
61 QASLTCNLCA LADSSSPIYM CPPCDFVVHL RCTGLPRVIK ISRHLHRISF TFSFDRGDLS 120
121 CSVCRRKIDE DYGGYTCIKD GCSYAAHSKC ATQKNVWDGI ELEGEPEEVE EEVVDPFVTI 180
181 SD
|
| Detection Method: | |
| Confidence: | 52.0 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [738-804] |
1 11 21 31 41 51
| | | | | |
1 GVIQHFGHPQ HHLRLDENTS RDYDEDKLCQ ACVMPIYFGN FYSCTQCNYI LHEACANFSR 60
61 KMHHPVH
|
| Detection Method: | |
| Confidence: | 15.69897 |
| Match: | 2ebtA |
| Description: | No description for 2ebtA was found. |
|
Region A: Residues: [805-917] |
1 11 21 31 41 51
| | | | | |
1 PHVLTLVNSD GAINVRKECA ACPWMCTTGF FYECSKEDFQ LHVQCANLSE PLVHESHMHP 60
61 LFLTSKPGER RLCSACKESY FSVTRETFNC IECDFALCFR CATLPQKVRY KHD
|
| Detection Method: | |
| Confidence: | 4.30103 |
| Match: | 2dlkA |
| Description: | No description for 2dlkA was found. |
|
Region A: Residues: [918-1016] |
1 11 21 31 41 51
| | | | | |
1 KHMLTLSYGE ETSTMTYWCE VCERNLNPKE RFYKCDEYCS ITLHIECMLG VALYIRPGSS 60
61 WICFNNKKIL IKMKAKKVAY TGIEPVTFAL LARRSNQLS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
