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Protein Overview: ACLB2_ARATH

General Information:
Name(s) found: ACLB2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9759429|dbj|BAB09916.1| ATP citrate lyase [Arabidopsis thaliana] [NCBI NR]
  • gi|17065616|gb|AAL33788.1| putative ATP citrate lyase [Arabidopsis thaliana] [NCBI NR]
  • gi|16648644|gb|AAL25638.1| ATP-citrate lyase subunit B [Arabidopsis thaliana] [NCBI NR]
  • gi|15239897|ref|NP_199757.1| ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2); ATP citrate synthase [Arabidopsis thaliana] [NCBI NR]
  • gi|14334788|gb|AAK59572.1| putative ATP citrate lyase [Arabidopsis thaliana] [NCBI NR]
  • ATP-citrate synthase beta chain protein 2 OS=Arabidopsis thaliana GN=ACLB-2 PE=1 SV=1 [Swiss-Prot]
  • (Q9FGX1) ATP citrate lyase (ATP-citrate lyase subunit B) [athaliana3702.FASTAC.txt]
  • putative ATP citrate lyase [Arabidopsis thaliana]gi|14334788|gb|AAK59572.1| putative ATP citrate lyase [Arabidopsis thaliana]gi|16648644|gb|AAL25638.1| ATP-citrate lyase subunit B [Arabidopsis thaliana]gi|15239897|ref|NP_199757.1| ATP-citrate synthase, [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 ATP-citrate synthase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ACLB-2 | ACLB-2 (ATP-citrate lyase B-2) | chr5:20072274-20075421 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATP citrate lyase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative ATP citrate lyase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ACLB-2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATP-citrate lyase subunit B [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ACLB-2 | ATP citrate lyase subunit B 2 | chr5:20055048-20058195 FORWARD LENGTH=608 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 608 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDA]
    citrate lyase complex [IDA]
    plasma membrane [IDA]
    Biological Process: acetyl-CoA biosynthetic process [TAS]
    Molecular Function: ATP citrate synthase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATGQLFSRT TQALFYNYKQ LPVQRMLDFD FLCGRETPSV AGIINPGSEG FQKLFFGQEE  60
   61 IAIPVHAAIE AACAAHPTAD VFINFASFRS AAASSMAALK QPTIKVVAII AEGVPESDTK 120
  121 QLIAYARANN KVVIGPATVG GIQAGAFKIG DTAGTIDNII QCKLYRPGSV GFVSKSGGMS 180
  181 NEMYNTVARV TDGIYEGIAI GGDVFPGSTL SDHILRFNNI PQIKMMVVLG ELGGRDEYSL 240
  241 VEALKEGKVN KPVVAWVSGT CARLFKSEVQ FGHAGAKSGG EMESAQAKNQ ALIDAGAIVP 300
  301 TSFEALESAI KETFEKLVEE GKVSPIKEVI PPQIPEDLNS AIKSGKVRAP THIISTISDD 360
  361 RGEEPCYAGV PMSSIIEQGY GVGDVISLLW FKRSLPRYCT KFIEICIMLC ADHGPCVSGA 420
  421 HNTIVTARAG KDLVSSLVSG LLTIGPRFGG AIDDAARYFK DACDRNLTPY EFVEGMKKKG 480
  481 IRVPGIGHRI KSRDNRDKRV ELLQKFARSN FPSVKYMEYA VTVETYTLSK ANNLVLNVDG 540
  541 AIGSLFLDLL AGSGMFTKQE IDEIVQIGYL NGLFVLARSI GLIGHTFDQK RLKQPLYRHP 600
  601 WEDVLYTK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..231] PSI-BLAST 82.154902 Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain; Succinyl-CoA synthetase, alpha-chain, C-terminal domain
    2 View Details [232..491] FFAS03 1.67 No description for 2ifcA was found.
    3 View Details [492..608] PSI-BLAST 92.30103 Citrate synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • fatty acid synthase activity
    		•  1.23679054027553 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.9367410227151 bayes_pls_golite062009
  • 3-oxoacyl-[acyl-carrier-protein] reductase activity
    		•  0.604742541607263 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.418775403210681 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.32207755075663 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.100470710829263 bayes_pls_golite062009
  • DNA binding
    		•  0.0870043837215047 bayes_pls_golite062009
  • alcohol dehydrogenase (NAD) activity
    		•  0.00644214957417527 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle