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Protein Overview: gi|15235439, gi|...

General Information:
Name(s) found: gi|7270659 [NCBI NR]
gi|4006867 [NCBI NR]
gi|25371571 [NCBI NR]
gi|15235439 [NCBI NR]
Description(s) found:
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  • gi|7270659|emb|CAB80376.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4006867|emb|CAB16785.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • pir||C85438 hypothetical protein AT4g37100 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15235439|ref|NP_195427.1| catalytic/ pyridoxal phosphate binding [Arabidopsis thaliana] [NCBI NR]
  • (O23176) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|7270659|emb|CAB80376.1| putative protein [Arabidopsis thaliana]gi|25371571|pir||C85438 hypothetical protein AT4g37100 [imported] - Arabidopsis thalianagi|15235439|ref|NP_195427.1| hypothetical protein [Arabidop [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | catalytic/ pyridoxal phosphate binding | chr4:17479167-17481857 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr4:17479173-17481863 REVERSE LENGTH=896 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Catalytic/ pyridoxal phosphate binding protein OS=Arabidopsis thaliana GN=C7A10.260 PE=4 SV=2 [ARATH-contam.fasta]
  • Putative uncharacterized protein AT4g37100 OS=Arabidopsis thaliana GN=C7A10.260 PE=4 SV=2 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 896 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: pyridoxal phosphate binding [IEA]
    catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFSLWKQIH HCASLILDKS KSSRRRRDGS DSSLNVKKKA ALIRKLYEDK LREALEEASE  60
   61 NGSLFKSQDI DQDNGDGSLG RSRSLARLHA QREFLRATAL AAERIIESED SIPELREALT 120
  121 KFLSMYPKYQ ASEKIDQLRS DEYSHLSSSA SKVCLDYCGF GLFSYVQTLH YWDTCTFSLS 180
  181 EITANLSNHA LYGGAESGTV EHDIKTRIMD YLNIPENEYG LVFTVSRGSA FRLLAESYPF 240
  241 QSNKRLLTMF DHESQSVNWM AQTAREKGAK AYNAWFKWPT LKLCSTDLKK RLSYKKRKKK 300
  301 DSAVGLFVFP AQSRVTGTKY SYQWMALAQQ NHWHVLLDAG SLGPKDMDSL GLSLFRPEFI 360
  361 ITSFYRVFGH DPTGFGCLLI KKSVMGSLQS QSGKTGSGIV KITPEYPLYL SDSVDGLDGL 420
  421 VGFEDHNDDK TKEAHRPGTQ MPAFSGAYTS AQVRDVFETE LLEDNISSDR DGTTSTTIFE 480
  481 ETESVSVGEL MKSPVFSEDE SSDNSFWIDL GQSPLGSDQH NKIASPLPPI WLTNKRKQKQ 540
  541 RQSPKPIPKS YSSPLYDGND VLSFDAAVMS VTEHGTNSTP SRNRRSSSNH LHVQEIQEEN 600
  601 CGHSFANGLK SSNISSEIKE SAIRRETEGE FRLLGGRDGG RSRLLGVEDE HPSKGRRVSF 660
  661 NMERVSHSIV EPGEASLASV YDEDYINTSD VENGDDEGAD DEWDRRDTET EIVCRHIDHV 720
  721 NMLGLNKTTT RLRFLINWLV ISLLQLQVPE SGGRHMNLVQ IYGPKIKYER GAAVAFNVRD 780
  781 KSKGFVSPEI VQRLGDREGV SLGIGILSHI RIVDEKPRNH RARTKEDSAL HLQNEAGKNG 840
  841 FIRFEVVTAS LSFLTNFEDV YKLWVFVAKF LNPGFSREGS LPTVEEEEEE AENSET

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] PSI-BLAST 10.045757 DOPA decarboxylase
    2 View Details [148..582] PSI-BLAST 81.69897 NifS-like protein/selenocysteine lyase
    3 View Details [583..662] deduced N/A No confident structure predictions are available.
    4 View Details [663..896] MSA 4.03699 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle