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Protein Overview: ROGFC_ARATH

General Information:
Name(s) found: ROGFC_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Rop guanine nucleotide exchange factor 12 OS=Arabidopsis thaliana GN=ROPGEF12 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 515 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: pollen tube growth [IEP]
    embryonic development ending in seed dormancy [IMP]
    Molecular Function: Rho guanyl-nucleotide exchange factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRASEQEQE TYRSRLFNFK WRNNDNNSAT RHNKSLSVET GLDEAATGSH DAEPLTIIHP  60
   61 SQGPPLSRSA ADEAVLAALA ASQARERQLL ADMEQMKERF SKLLLGEDNS GGGKGVSSAL 120
  121 ALSNAITNLA ASVFGEQRRL EPMPAERRAR WRKEIDWLLS VTDYVVEFAP SQQKNKDGTN 180
  181 MEIMTTRQRT DLHMNIPALK KLDAMLIDCL ENFKDQSEFS YISKDSPDLD GKRNDEKWWI 240
  241 PTVKVPPDGL SEASRRFLQY QKDCVNQVLK AAMAINAQVL FEMEIPESYI DSLPKNGRAS 300
  301 LGDQMYKNIT VDFFDPDQFL SSMDMSSEHK IVDLKNRIEA SIIIWKRKMV YKDNKSSAPW 360
  361 ASGVSLEKRE VFEERAETIL LILKQRYPGI SQSSLDISKI QFNEDVGQAV LESYSRILES 420
  421 LAYTVLSRID DVLEADRAGN KRNTPLEAEE ETLVGSMTLS DFMGWDFDQA ANAELESKKD 480
  481 LPDDPLIKEK LSVVTTKKTS YLETLGGVKS PTARH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..82] deduced N/A No confident structure predictions are available.
    2 View Details [83..515] PSI-BLAST 1000.0 No description for 2ntxA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle