YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: DRB2_ARATH

General Information:
Name(s) found: DRB2_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|4432839|gb|AAD20688.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • pir||B84684 hypothetical protein At2g28380 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|18401724|ref|NP_565672.1| DRB2 (DSRNA-BINDING PROTEIN 2); double-stranded RNA binding [Arabidopsis thaliana] [NCBI NR]
  • gi|17065634|gb|AAL33811.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|14334606|gb|AAK59481.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana GN=DRB2 PE=1 SV=1 [Swiss-Prot]
  • (Q9SKN2) At2g28380 protein (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|14334606|gb|AAK59481.1| unknown protein [Arabidopsis thaliana]gi|4432839|gb|AAD20688.1| expressed protein [Arabidopsis thaliana]gi|25407980|pir||B84684 hypothetical protein At2g28380 [imported] - Arabidopsis tha [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Encodes a cytoplasmic dsRNA-binding protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: DRB2 | DRB2 (DSRNA-BINDING PROTEIN 2); double-stranded RNA binding | chr2:12141175-12142992 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • expressed protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • double-stranded RNA binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: DRB2 | dsRNA-binding protein 2 | chr2:12134098-12135915 REVERSE LENGTH=434 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 434 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: double-stranded RNA binding [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKNQLQELA QRSCFNLPSY TCIREGPDHA PRFKATVNFN GEIFESPQYC STLRQAEHSA  60
   61 AEVALNALSN RGPSHSLAAR ILDETGVYKN LLQEIAQRVG APLPRYTTFR SGLGHQPVFT 120
  121 GTVELAGITF TGDPAKNKKQ AEKNAAMAAW SSLKQLAKET SSSMPEPENI DELEQVIIAR 180
  181 ALINYRIKEN IGTGSSSSAP VPFAKKFFMQ NLRPTSPQPS PATTSRILPF ICPKQPSRSS 240
  241 RSSLAATSGI DRIMAAALES RSYQRPQQRF ANPPYVPMRQ FRSQCHGMAP PVTIRTAVPV 300
  301 FSAPPMPPPP CTNNTQLPSS VYVPSLMRTA PPVRIAPPVT IRTAVPVFAS APPVRIRTAV 360
  361 KPTVEAGETR ISSVQEKESI PVLPDSLEIG VEGSTITITD CEKTASKETE RAEFKDSSKG 420
  421 EPETARERLE NLKI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] PSI-BLAST 30.39794 RNase III endonuclease catalytic domain; RNase III, C-terminal domain
    2 View Details [152..262] deduced N/A No confident structure predictions are available.
    3 View Details [263..434] MSA 4.131993 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.602312874472495 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle