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Protein Overview: gi|11280530, gi|...

General Information:
Name(s) found: gi|6735314 [NCBI NR]
gi|15230280 [NCBI NR]
gi|11280530 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|6735314|emb|CAB68141.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15230280|ref|NP_191294.1| nucleoporin interacting component-related [Arabidopsis thaliana] [NCBI NR]
  • pir||T45813 hypothetical protein F28O9.200 - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 875 amino acids

    Gene Ontology:
    Cellular Component: nuclear pore [IEA]
    Biological Process: transport [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANDQEMSGW TDLLHSSTKL LEQAAPSSQF PPLQVLLLTT TLFDFEPPNL DQLEALSRKL  60
   61 KAKTLRNEAP SQSIAATRLL AREGINADQL SRDLKSFELK TTFEDVFPAE TTSVEEYLQQ 120
  121 VHEMAMVSAI QEAQKDNVRS FNNYMLKVLE EDCIKEKRDF LHSLSKTSML PKTKMINSSR 180
  181 GSHAGSLVPL SPQVSSKPGT ELVSMTNKPI HEKKAYVYAE VVKKLNSARE RGLPFKLATL 240
  241 FNGAYESLEI DLTRGKSVNM QKLWQLIQGM TGEESAVQHG VSKRMALVIG ARRHLECGHG 300
  301 KHIMDTIKSH PTQAALGGSV GNLQRIRAFL RIRLRDYGSL DFDSVDARRQ PPVDTTWQQE 360
  361 AREIAQSSRS SQQQFAPLLT EWITTGGTVA AQTAATASEE CEKLLRMGDR FGQTTYDKKK 420
  421 LLLYTIISGS RRQIDRIMRD FSTLFNTIED FLWFKLSCVR DVAGGSSSMI VNDGLVPYSL 480
  481 DDLQAYLNKF EPSYYTKNGK DPLVYPYVLL LSIQLLPAIM HMSNEAGDEG YNIDAVHVAI 540
  541 SLVDHSILSE GSGTGRKLSV MDANAEASSM IRQYGSMYLH HGDLQMTLEY YAQAAIAVGG 600
  601 GQQAWSGRSN VDQQRQRNLM LKQLLTEILS QEDGIHFLLG ARGSGEEGEL GRFLPDIKLR 660
  661 QQFLIEAAHQ FQEAGLYDKS IELQKRVGAF SSALETINKC LSEAICSLVR GRPDGESRTE 720
  721 GLVLSGNDIL NSYKYHPDVR EVLTGSVILL YYSAQERHLV MEQETILREL EAILSIHKLA 780
  781 RLNKHLDAIR EVAKLPFLHL DPRQPDTTSD EFQKASSYFQ TCVPDLLKVA LTCLDNVADT 840
  841 DGSIRGMRSK IAGFLASNTQ RNWPRDLYEK IARSF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..180] MSA 2.036994 View MSA. No confident structure predictions are available.
    2 View Details [181..875] PSI-BLAST 153.0 No description for 2qx5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle