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Protein Overview: gi|25406452, gi|...

General Information:
Name(s) found: gi|25406452 [NCBI NR]
gi|15223080 [NCBI NR]
gi|12323987 [NCBI NR]
Description(s) found:
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  • pir||C96793 unknown protein F14G6.13 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15223080|ref|NP_177779.1| auxin efflux carrier family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12323987|gb|AAG51958.1|AC015450_19 unknown protein; 54709-56576 [Arabidopsis thaliana] [NCBI NR]
  • (Q9C9K4) Hypothetical protein [athaliana3702.FASTAC.txt]
  • unknown protein; 54709-56576 [Arabidopsis thaliana]gi|25406452|pir||C96793 unknown protein F14G6.13 [imported] - Arabidopsis thalianagi|15223080|ref|NP_177779.1| auxin efflux carrier family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Auxin efflux carrier family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | auxin efflux carrier family protein | chr1:28723301-28725168 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • auxin:hydrogen symporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein; 54709-56576 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Auxin efflux carrier family protein | chr1:28718407-28720274 FORWARD LENGTH=415 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Auxin efflux carrier-like protein OS=Arabidopsis thaliana GN=F14G6.13 PE=4 SV=1 [ARATH-contam.fasta]
  • Auxin efflux carrier family protein OS=Arabidopsis thaliana GN=F14G6.13 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 415 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    endomembrane system [IEA]
    Biological Process: auxin polar transport [ISS]
    Molecular Function: auxin:hydrogen symporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLELFIAS SKPVVETLLI TSVGFYLALD TVNLLGHDAR KHLNNIVFYV FSPSLIGSRL  60
   61 ADSVTYESLV KMWFMPVNVL LTFMIGSLLG WIVIVITKPP SQLRGLIISC CASGNLGTMP 120
  121 LIIIPAICKE KGGPFGDSES CEKYGMGYVT LSMTAFFISV YKHDTNWYVS GGNGLLMDLY 180
  181 INLMRVLSNS PVETHTHSIE SNYDDSCKVQ LISSKEEEKE EDNHQVGRWE EVKQRVVSLS 240
  241 KKVNLGSIFA PATIAAIIAL VIGLITPLRN LIIGTVAPFR VIQDSLTLLG DGAIPAMTLI 300
  301 LGGNLLKGMR RSEVRSSEMK NSCIIGVLVA RYILLPVSGV LLVRGAYKLD LVTSEPLYQF 360
  361 VLLLQYAVPP AMNLGTKTQL FGAGESECSV IMLWTYSLAA VSLTVWPTFF MWLVT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..136] MSA 20.357997 View MSA. No confident structure predictions are available.
    2 View Details [137..248] deduced N/A No confident structure predictions are available.
    3 View Details [249..415] MSA 65.433997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle