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Protein Overview: gi|25350651, gi|...

General Information:
Name(s) found: gi|25350651 [NCBI NR]
gi|15218492 [NCBI NR]
gi|12325271 [NCBI NR]
Description(s) found:
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  • pir||E96748 hypothetical protein T10D10.9 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15218492|ref|NP_177388.1| EDA25 (embryo sac development arrest 25) [Arabidopsis thaliana] [NCBI NR]
  • gi|12325271|gb|AAG52578.1|AC016529_9 hypothetical protein; 39633-44904 [Arabidopsis thaliana] [NCBI NR]
  • (Q9C9E2) Hypothetical protein [athaliana3702.FASTAC.txt]
  • hypothetical protein; 39633-44904 [Arabidopsis thaliana]gi|25350651|pir||E96748 hypothetical protein T10D10.9 [imported] - Arabidopsis thalianagi|15218492|ref|NP_177388.1| CCAAT-box-binding transcription factor-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 CCAAT-box-binding transcription factor-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • hypothetical protein; 39633-44904 [Arabidopsis thaliana] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1056 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKIKPLSKS SQDLSLLTSD IASFASSIGL ASALPSSGFN DTDFRKPAKS KTQKRKKPKK  60
   61 DQQHKDEDEE GEPKSNIGNE KGKDFGARKQ NKDAPVKQTL QPKPKPGFLS IDDESTGYKK 120
  121 KRFDEFKSLP KLPLVKASLL SSEWYNDAAE FEEKVFGGRK VAVANKEDFK GVVEKKRELG 180
  181 ERLMWQYAED FATSKGKGGD MKMVISAQKS GTVADKITAF EIMVGENPIA NMRSLDALLG 240
  241 MVTSKVGKRF AFKGLKALSE ILIRHIFLTH TMSYGFMLLP DRKLKSLLQR PLNIIPENKD 300
  301 GYSLLLFWYW EDCLKQRYER FVTALDESSK DMLPELKDKA LKTIYFMLTS KSEQERKLLV 360
  361 SLVNKLGDPQ NKSASNADYH LTNLLADHPN MKAVVIDEVD SFLFRPHLGL RAKYHAVNFL 420
  421 SQIRLSHKGE DPKVAKRLID VYFALFKVLT TEANRKQGAD DKGAADKKKS NPKDTKQEVS 480
  481 TDSPIELDSR ILSALLTGVN RAFPYVSTDE ADDIIESQTP VLFKLVHSAN FNVGVQSLML 540
  541 LDKISSKNKI VSDRFYRALY SKLLLPSAMN SSKAEMFIGL LLRAMKNDIN IKRVAAFSKR 600
  601 VLQVALQQPP QYACGCLFLL SEVLKSRPPL WKMVVQRESV EEEEDIEHFE DVIEGDDVDP 660
  661 NKKAENDENV VEVDHDGVEK SSRDGDSSSD DEEALAIRLS DEEDDNASDD SEELIRNETP 720
  721 QLEEVMEVSN DMEKRSQPPM RPSSLPGGYD PRHREPSYCN ADRASWWELG VLSKHAHPSV 780
  781 ATMAGTLLSG TNIVYNGNPL NDLSLTAFLD KFMEKKPKQN TWHGGSQIEP SKKLDMSNRV 840
  841 IGAEILSLAE GDVAPEDLVF HKFYVNKMTS TKQSKKKKKK KLPEEEAAEE LYDVNDGDGG 900
  901 ENYDSDVEFE AGDESDNEEI ENMLDDVDDN AVEEEGGEYD YDDLDGVAGE DDEELVADVS 960
  961 DAEMDTDMDM DLIDDEDDNN VDDDGTGDGG DDDSDGDDGR SKKKKKEKRK RKSPFASLEE1020
 1021 YKHLIDQDEK EDSKTKRKAT SEPTKKKKKK KSKASE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] deduced N/A No confident structure predictions are available.
    2 View Details [127..709] FFAS03 1.05 Adaptin beta subunit N-terminal fragment
    3 View Details [710..789] deduced N/A No confident structure predictions are available.
    4 View Details [790..1056] MSA 4.082996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.267627928716605 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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